Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN7AQ01118 AL359693.1-201ENST00000614959 2407 ntBASIC3.75□□□□□ -1.81
SCN7AQ01118 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN7AQ01118 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN7AQ01118 AC022018.1-201ENST00000430685 241 ntBASIC3.75□□□□□ -1.81
SCN7AQ01118 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN7AQ01118 THAP12P8-201ENST00000447914 2115 ntBASIC3.75□□□□□ -1.81
SCN7AQ01118 RPL7L1P13-201ENST00000511702 739 ntBASIC3.75□□□□□ -1.81
SCN7AQ01118 AC079600.2-201ENST00000550076 130 ntBASIC3.75□□□□□ -1.81
SCN7AQ01118 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN7AQ01118 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.75□□□□□ -1.81
SCN7AQ01118 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SCN7AQ01118 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN7AQ01118 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN7AQ01118 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN7AQ01118 RN7SKP247-201ENST00000411094 308 ntBASIC3.74□□□□□ -1.81
SCN7AQ01118 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN7AQ01118 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN7AQ01118 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN7AQ01118 RN7SKP272-201ENST00000516988 232 ntBASIC3.74□□□□□ -1.81
SCN7AQ01118 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN7AQ01118 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN7AQ01118 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN7AQ01118 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN7AQ01118 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SCN7AQ01118 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SCN7AQ01118 AL445528.1-201ENST00000426330 420 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 RPL32P28-201ENST00000443577 397 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN7AQ01118 RN7SL20P-201ENST00000488827 297 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 AC108078.3-201ENST00000502633 489 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 AC010486.1-201ENST00000511793 424 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 RNA5SP217-201ENST00000515959 91 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN7AQ01118 AC004832.5-201ENST00000608677 401 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 LINC00901.1-201ENST00000617252 152 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 AC022509.4-201ENST00000621404 572 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 AC099654.11-201ENST00000638857 294 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 AL592494.2-201ENST00000425455 1548 ntBASIC3.73□□□□□ -1.81
SCN7AQ01118 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN7AQ01118 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN7AQ01118 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN7AQ01118 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN7AQ01118 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN7AQ01118 MIR423-201ENST00000362201 94 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 MIR184-201ENST00000384962 84 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 MIR34A-201ENST00000385130 110 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 PPIAP17-201ENST00000438507 471 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 AC108938.1-201ENST00000451204 136 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 HMGN1P18-201ENST00000457642 277 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 AC126389.1-201ENST00000477436 290 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 AC073476.4-201ENST00000628409 72 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SCN7AQ01118 GABRG2-229ENST00000641017 3628 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN7AQ01118 ZNF826P-207ENST00000622273 1910 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 AC107027.3-201ENST00000565095 3473 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SCN7AQ01118 AC012020.1-201ENST00000624541 1728 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN7AQ01118 LINC01355-201ENST00000566551 5444 ntBASIC3.72□□□□□ -1.81
SCN7AQ01118 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN7AQ01118 RNU4-82P-201ENST00000362443 140 ntBASIC3.71□□□□□ -1.81
SCN7AQ01118 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SCN7AQ01118 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SCN7AQ01118 AMD1P2-201ENST00000412936 992 ntBASIC3.71□□□□□ -1.81
SCN7AQ01118 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.71□□□□□ -1.81
SCN7AQ01118 OR5H3P-201ENST00000502817 919 ntBASIC3.71□□□□□ -1.81
SCN7AQ01118 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.71□□□□□ -1.81
SCN7AQ01118 AC067852.4-201ENST00000590314 478 ntBASIC3.71□□□□□ -1.81
SCN7AQ01118 NRBF2P5-201ENST00000603087 788 ntBASIC3.71□□□□□ -1.81
SCN7AQ01118 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SCN7AQ01118 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SCN7AQ01118 MTND4P10-201ENST00000446199 1363 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN7AQ01118 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SCN7AQ01118 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.71□□□□□ -1.82
SCN7AQ01118 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SCN7AQ01118 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SCN7AQ01118 AC127526.1-201ENST00000417526 366 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 ARL5AP4-201ENST00000430731 512 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 AC087499.2-201ENST00000432861 149 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 AP000936.3-201ENST00000438127 255 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 METTL15P1-201ENST00000481421 1045 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN7AQ01118 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN7AQ01118 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.71□□□□□ -1.82
SCN7AQ01118 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.71□□□□□ -1.82
SCN7AQ01118 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN7AQ01118 AL049844.2-201ENST00000604280 628 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 AL592295.2-201ENST00000612578 206 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 AC116096.1-201ENST00000566804 2314 ntBASIC3.71□□□□□ -1.82
SCN7AQ01118 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SCN7AQ01118 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCN7AQ01118 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN7AQ01118 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.7□□□□□ -1.82
SCN7AQ01118 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN7AQ01118 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
SCN7AQ01118 SETP12-201ENST00000514068 805 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms