Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.08□□□□□ -1.76
CCNA1P78396 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.08□□□□□ -1.76
CCNA1P78396 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.08□□□□□ -1.76
CCNA1P78396 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.08□□□□□ -1.76
CCNA1P78396 MIR4644-201ENST00000579929 84 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.08□□□□□ -1.76
CCNA1P78396 AL133383.2-201ENST00000622958 2336 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCNA1P78396 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCNA1P78396 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.07□□□□□ -1.76
CCNA1P78396 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCNA1P78396 SNORD17-201ENST00000390930 237 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 TAF9BP1-201ENST00000396646 746 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 EIF5P1-201ENST00000400019 1231 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 RNU2-37P-201ENST00000410695 177 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.07□□□□□ -1.76
CCNA1P78396 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.07□□□□□ -1.76
CCNA1P78396 AC005300.1-201ENST00000428401 373 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.07□□□□□ -1.76
CCNA1P78396 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.07□□□□□ -1.76
CCNA1P78396 U3.44-201ENST00000458938 192 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.07□□□□□ -1.76
CCNA1P78396 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCNA1P78396 AC093755.1-201ENST00000512950 1023 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 IGKV2D-23-201ENST00000518179 286 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 AC008562.1-201ENST00000521763 330 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.07□□□□□ -1.76
CCNA1P78396 AC023161.2-201ENST00000551218 780 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.07□□□□□ -1.76
CCNA1P78396 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.07□□□□□ -1.76
CCNA1P78396 SUMO2P14-201ENST00000604488 293 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 YPEL5P2-201ENST00000605553 359 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 AC113194.1-201ENST00000606037 500 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCNA1P78396 MIR8057-201ENST00000620957 69 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 U4.6-201ENST00000621618 127 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.07□□□□□ -1.76
CCNA1P78396 FAM157B-203ENST00000639350 358 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCNA1P78396 AC119744.1-201ENST00000454746 1715 ntBASIC4.07□□□□□ -1.76
CCNA1P78396 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCNA1P78396 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
CCNA1P78396 SNORA31-201ENST00000362607 130 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 SNORA48.2-201ENST00000390926 124 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 DHFRP5-201ENST00000406944 564 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 RANP4-201ENST00000413361 655 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 NUP35P2-201ENST00000416748 943 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 DBIP2-201ENST00000419076 262 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNA1P78396 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.06□□□□□ -1.76
CCNA1P78396 ATP5HP2-201ENST00000433885 485 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.06□□□□□ -1.76
CCNA1P78396 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNA1P78396 AC078918.1-201ENST00000498515 228 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.06□□□□□ -1.76
CCNA1P78396 RNU6-889P-201ENST00000517189 103 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNA1P78396 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNA1P78396 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
CCNA1P78396 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNA1P78396 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNA1P78396 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNA1P78396 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCNA1P78396 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCNA1P78396 HSPA8P19-201ENST00000505359 1517 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 ZNF833P-201ENST00000424938 1494 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
CCNA1P78396 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNA1P78396 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNA1P78396 CEP170P1-201ENST00000502249 4587 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNA1P78396 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CCNA1P78396 MTND2P11-201ENST00000423638 648 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC017083.1-201ENST00000428093 483 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 RPL21P110-201ENST00000433345 446 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNA1P78396 EXTL2P1-201ENST00000446218 416 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC115115.1-201ENST00000449927 248 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 BTF3P5-201ENST00000457252 467 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AL133477.1-201ENST00000457472 514 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNA1P78396 AC091917.2-201ENST00000505002 744 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 USP9YP5-201ENST00000511770 630 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNA1P78396 RNU6-579P-201ENST00000516879 102 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.05□□□□□ -1.76
CCNA1P78396 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNA1P78396 AC090751.1-201ENST00000566966 267 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 EIF1P6-201ENST00000600054 334 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNA1P78396 LINC00216-201ENST00000623548 1126 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 MIR4278-201ENST00000636094 69 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNA1P78396 AC011978.2-201ENST00000569835 2054 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms