Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC100832.1-201ENST00000471945 383 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 AC020661.2-201ENST00000560114 134 ntBASIC5.27□□□□□ -1.57
YBX1P67809 MIR4675-201ENST00000577898 77 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 AC006504.6-201ENST00000590142 199 ntBASIC5.27□□□□□ -1.57
YBX1P67809 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 uc_338.5-201ENST00000611839 155 ntBASIC5.27□□□□□ -1.57
YBX1P67809 DISC2.1-201ENST00000612827 205 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AC118658.2-201ENST00000618697 459 ntBASIC5.27□□□□□ -1.57
YBX1P67809 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 AC138305.3-201ENST00000624988 240 ntBASIC5.27□□□□□ -1.57
YBX1P67809 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 Z95114.1-201ENST00000624264 14574 ntBASIC5.27□□□□□ -1.57
YBX1P67809 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 AL078621.3-201ENST00000623707 2042 ntBASIC5.26□□□□□ -1.57
YBX1P67809 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 LINC00622-201ENST00000562811 1570 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AL591135.1-201ENST00000401578 5914 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RBPJP2-201ENST00000618187 1444 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RNA5SP319-201ENST00000362768 119 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RNU1-39P-201ENST00000383897 165 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RNU6-225P-201ENST00000384613 103 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AC068050.1-201ENST00000394891 380 ntBASIC5.26□□□□□ -1.57
YBX1P67809 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.26□□□□□ -1.57
YBX1P67809 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 RPS20P2-201ENST00000402520 389 ntBASIC5.26□□□□□ -1.57
YBX1P67809 MRPL42P2-201ENST00000403169 426 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AL133388.1-201ENST00000404509 287 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RNU6-1068P-201ENST00000410958 103 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RN7SKP216-201ENST00000411050 312 ntBASIC5.26□□□□□ -1.57
YBX1P67809 SRSF1P1-201ENST00000424058 520 ntBASIC5.26□□□□□ -1.57
YBX1P67809 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 AC006480.1-201ENST00000449887 378 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
YBX1P67809 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 RPL32P9-201ENST00000487963 407 ntBASIC5.26□□□□□ -1.57
YBX1P67809 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.26□□□□□ -1.57
YBX1P67809 Vault.3-201ENST00000516676 95 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RN7SKP116-201ENST00000516902 319 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RNU6-835P-201ENST00000516974 104 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RN7SKP99-201ENST00000517028 307 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RNU6-1003P-201ENST00000517099 105 ntBASIC5.26□□□□□ -1.57
YBX1P67809 RN7SKP283-201ENST00000517197 270 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 AP004607.2-201ENST00000533949 322 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.26□□□□□ -1.57
YBX1P67809 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.26□□□□□ -1.57
YBX1P67809 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.26□□□□□ -1.57
YBX1P67809 AC055876.1-202ENST00000567053 138 ntBASIC5.26□□□□□ -1.57
YBX1P67809 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
YBX1P67809 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 MIR8080-201ENST00000622224 89 ntBASIC5.26□□□□□ -1.57
YBX1P67809 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.26□□□□□ -1.57
YBX1P67809 AC021106.3-201ENST00000623925 531 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AC138649.5-201ENST00000637456 137 ntBASIC5.26□□□□□ -1.57
YBX1P67809 AC073869.8-201ENST00000641806 335 ntBASIC5.26□□□□□ -1.57
YBX1P67809 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.26□□□□□ -1.57
YBX1P67809 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
YBX1P67809 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
YBX1P67809 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
YBX1P67809 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
YBX1P67809 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
YBX1P67809 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
YBX1P67809 MIR133B-201ENST00000362210 119 ntBASIC5.25□□□□□ -1.57
YBX1P67809 RNU1-19P-201ENST00000363306 165 ntBASIC5.25□□□□□ -1.57
YBX1P67809 RN7SKP162-201ENST00000363605 345 ntBASIC5.25□□□□□ -1.57
YBX1P67809 RNU6-359P-201ENST00000365466 108 ntBASIC5.25□□□□□ -1.57
YBX1P67809 SNORA69-201ENST00000383895 132 ntBASIC5.25□□□□□ -1.57
YBX1P67809 RNU6-657P-201ENST00000383904 107 ntBASIC5.25□□□□□ -1.57
YBX1P67809 RNU6-456P-201ENST00000384493 107 ntBASIC5.25□□□□□ -1.57
YBX1P67809 AL162578.1-201ENST00000406202 378 ntBASIC5.25□□□□□ -1.57
YBX1P67809 MTATP6P18-201ENST00000417994 673 ntBASIC5.25□□□□□ -1.57
YBX1P67809 DPPA2P2-201ENST00000418220 897 ntBASIC5.25□□□□□ -1.57
YBX1P67809 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 OR2B7P-201ENST00000429302 934 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms