Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RPS4XP62701 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPS4XP62701 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.62□□□□□ -1.83
RPS4XP62701 UBE3AP2-201ENST00000429033 2259 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RPS4XP62701 RNU5E-10P-201ENST00000363506 118 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RPS4XP62701 RNU11-4P-201ENST00000391149 133 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 ZNF603P-201ENST00000405613 487 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 HSPE1P12-201ENST00000412576 301 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 TPT1P2-201ENST00000413105 503 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 IFNNP1-201ENST00000429219 553 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 KCTD9P3-201ENST00000434597 1169 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 AL356535.1-201ENST00000440335 398 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 AC146507.1-201ENST00000468335 354 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 VN1R105P-201ENST00000486595 910 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 RPL7P24-201ENST00000493052 752 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC005726.1-201ENST00000494679 427 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC010460.1-201ENST00000507087 466 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 AC119751.4-201ENST00000507498 357 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC109471.1-201ENST00000511631 612 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC108064.1-201ENST00000513791 460 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 RNU1-45P-201ENST00000517191 141 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 DEFB130C-202ENST00000530001 230 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.61□□□□□ -1.83
RPS4XP62701 OR8L1P-201ENST00000534005 955 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 AL360157.1-201ENST00000565962 87 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.61□□□□□ -1.83
RPS4XP62701 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 AC074051.3-201ENST00000570238 358 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.61□□□□□ -1.83
RPS4XP62701 AC053481.4-201ENST00000583164 216 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 CCDC58P3-201ENST00000590792 430 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 AC073387.2-201ENST00000604797 784 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 RNA5SP108-201ENST00000605921 117 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC024060.1-201ENST00000607052 494 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 OR6R2P-201ENST00000609216 300 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 AL356121.2-201ENST00000624715 780 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 AC099654.8-201ENST00000637757 681 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 RLIMP1-201ENST00000339626 1680 ntBASIC3.61□□□□□ -1.83
RPS4XP62701 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPS4XP62701 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RPS4XP62701 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.61□□□□□ -1.83
RPS4XP62701 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 DBF4P1-201ENST00000412976 1892 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 Z82217.1-201ENST00000625157 8149 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.6□□□□□ -1.83
RPS4XP62701 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPS4XP62701 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 OR11H4-201ENST00000315409 1082 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 RNU6-839P-201ENST00000363347 108 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 RNU6-441P-201ENST00000384545 106 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 SNORD116-23-201ENST00000384645 92 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 MIR124-3-201ENST00000384866 87 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL121978.1-201ENST00000402778 359 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL139098.1-201ENST00000407291 389 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 MTND4P3-201ENST00000417829 541 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL391219.1-201ENST00000422570 483 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms