Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC006210.2-201ENST00000367074 1545 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CLRN1P58418 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 Y_RNA.46-201ENST00000362695 102 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 SNORA72.1-201ENST00000363485 129 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 RNU1-146P-201ENST00000364015 165 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 Y_RNA.409-201ENST00000383990 98 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 FGF7P8-201ENST00000402994 292 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 RPL7P25-201ENST00000404151 721 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.63□□□□□ -1.67
CLRN1P58418 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.63□□□□□ -1.67
CLRN1P58418 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 SNRPEP8-201ENST00000442866 260 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 HSPE1P28-201ENST00000443139 211 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 PRPF38AP1-201ENST00000451976 933 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 Z92846.1-201ENST00000456203 268 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC108161.1-201ENST00000461060 402 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC091180.1-201ENST00000462104 372 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 PABPC1P3-201ENST00000469174 459 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC104563.1-201ENST00000476147 376 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 RPS4XP20-201ENST00000505751 772 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 OR5M14P-201ENST00000506803 618 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC098799.2-201ENST00000509466 868 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC105914.1-201ENST00000511798 226 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC010493.1-201ENST00000513479 292 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC100784.1-201ENST00000522790 310 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.63□□□□□ -1.67
CLRN1P58418 ADI1P3-201ENST00000549509 470 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC034268.2-201ENST00000571784 482 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC110743.1-201ENST00000584870 478 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 BNIP3P33-201ENST00000598912 569 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC011445.2-201ENST00000599274 173 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC245014.2-201ENST00000603689 287 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AC246785.4-201ENST00000605374 287 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 RNU6-87P-201ENST00000607561 108 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC116447.1-201ENST00000613153 453 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 AL732618.1-201ENST00000623251 301 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 AP000756.2-201ENST00000624168 2567 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.63□□□□□ -1.67
CLRN1P58418 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLRN1P58418 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.62□□□□□ -1.67
CLRN1P58418 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLRN1P58418 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLRN1P58418 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLRN1P58418 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.62□□□□□ -1.67
CLRN1P58418 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.62□□□□□ -1.67
CLRN1P58418 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CLRN1P58418 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLRN1P58418 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
CLRN1P58418 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLRN1P58418 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.62□□□□□ -1.67
CLRN1P58418 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.62□□□□□ -1.67
CLRN1P58418 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CLRN1P58418 Y_RNA.1-201ENST00000352915 104 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 Y_RNA.70-201ENST00000362886 110 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 RN7SKP160-201ENST00000363804 340 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 RNU6-694P-201ENST00000364071 147 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 RNU6-1226P-201ENST00000384317 107 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 MIR600-201ENST00000385007 98 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 U3.25-201ENST00000391209 220 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 RNU6-603P-201ENST00000411403 107 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 AC009237.5-201ENST00000414271 501 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 AC138393.2-201ENST00000414742 246 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 AL139413.1-201ENST00000421309 217 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLRN1P58418 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.62□□□□□ -1.67
CLRN1P58418 RPL31P35-201ENST00000431058 377 ntBASIC4.62□□□□□ -1.67
CLRN1P58418 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms