Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN18P56856 AL034408.1-202ENST00000636088 415 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN18P56856 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN18P56856 AP001148.1-201ENST00000624124 2359 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
CLDN18P56856 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN18P56856 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN18P56856 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 MIR670-201ENST00000390142 98 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AL138880.1-201ENST00000405824 642 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AL513175.1-201ENST00000431492 780 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN18P56856 YWHAZP8-201ENST00000436935 731 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 VN1R34P-201ENST00000447387 883 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 RPS3AP46-201ENST00000448352 682 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC109458.1-201ENST00000508858 316 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 AC016065.2-201ENST00000514530 444 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 RNU6-1231P-201ENST00000517185 103 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN18P56856 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN18P56856 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN18P56856 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN18P56856 MIR92B-201ENST00000607575 96 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC025016.1-201ENST00000616746 682 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC018926.3-201ENST00000618841 406 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC083865.1-201ENST00000636634 831 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AC017104.5-201ENST00000637647 639 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN18P56856 MTND5P28-201ENST00000438005 1594 ntBASIC3.32□□□□□ -1.88
CLDN18P56856 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN18P56856 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CLDN18P56856 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN18P56856 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN18P56856 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN18P56856 MTND4P8-201ENST00000514997 1362 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN18P56856 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN18P56856 RNU6-1243P-201ENST00000364028 107 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 MIR449B-201ENST00000384995 97 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 RNA5SP171-201ENST00000391071 115 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN18P56856 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN18P56856 AL121972.1-201ENST00000402023 252 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AC092745.2-202ENST00000411880 369 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 TATDN1P1-201ENST00000414123 891 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AC007390.1-201ENST00000415722 356 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN18P56856 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN18P56856 AC091286.1-201ENST00000431233 461 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 USP9YP31-201ENST00000431405 881 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 MTND4LP7-201ENST00000431728 294 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 PTP4A1P3-201ENST00000433661 420 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN18P56856 AL356535.1-201ENST00000440335 398 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AC009263.1-201ENST00000441193 1239 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AL662791.1-201ENST00000441992 928 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN18P56856 RSL24D1P2-201ENST00000445584 366 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 RPL23AP23-201ENST00000452590 471 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 MTND3P4-201ENST00000453537 303 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AC069499.1-201ENST00000489433 509 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN18P56856 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CLDN18P56856 HMGB3P15-201ENST00000507326 574 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 SLC25A15P5-201ENST00000508033 253 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN18P56856 RN7SKP18-201ENST00000516005 275 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 RNA5SP143-201ENST00000516936 115 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 MTCYBP41-201ENST00000528913 1123 ntBASIC3.31□□□□□ -1.88
CLDN18P56856 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN18P56856 PDCL2P2-201ENST00000533651 189 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms