Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN6P56747 BTF3L4P4-201ENST00000506381 449 ntBASIC3.44□□□□□ -1.86
CLDN6P56747 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN6P56747 RNA5SP309-201ENST00000516670 106 ntBASIC3.44□□□□□ -1.86
CLDN6P56747 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CLDN6P56747 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN6P56747 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN6P56747 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN6P56747 AC015911.5-201ENST00000587076 451 ntBASIC3.44□□□□□ -1.86
CLDN6P56747 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN6P56747 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN6P56747 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN6P56747 AC242628.1-201ENST00000606810 391 ntBASIC3.44□□□□□ -1.86
CLDN6P56747 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 AC024023.1-201ENST00000624530 922 ntBASIC3.44□□□□□ -1.86
CLDN6P56747 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN6P56747 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN6P56747 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 AC007656.2-201ENST00000624902 4547 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN6P56747 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CLDN6P56747 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
CLDN6P56747 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN6P56747 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 RNU6-98P-201ENST00000384173 107 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 MTATP6P31-201ENST00000406985 692 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 AC244453.4-201ENST00000419150 388 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 AC005019.1-201ENST00000436455 431 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 RPL7P28-201ENST00000437739 740 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN6P56747 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN6P56747 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN6P56747 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN6P56747 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN6P56747 EIF4BP1-201ENST00000554881 351 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN6P56747 TRAV15-201ENST00000556680 249 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN6P56747 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN6P56747 AL606834.2-201ENST00000602954 668 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN6P56747 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN6P56747 AC138649.5-201ENST00000637456 137 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN6P56747 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN6P56747 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 MTCO1P8-201ENST00000416914 1523 ntBASIC3.43□□□□□ -1.86
CLDN6P56747 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN6P56747 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN6P56747 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN6P56747 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN6P56747 AP001486.2-201ENST00000561652 5113 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN6P56747 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLDN6P56747 AL024507.1-201ENST00000412741 274 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN6P56747 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN6P56747 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AC017079.2-201ENST00000416102 485 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN6P56747 NDUFB1P1-201ENST00000435191 180 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 U3.44-201ENST00000458938 192 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 TRBV12-2-201ENST00000489763 344 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN6P56747 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 PHBP14-201ENST00000512887 367 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN6P56747 HAUS1P3-201ENST00000523909 662 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN6P56747 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN6P56747 AC092851.1-201ENST00000535964 478 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 RFPL1S-203ENST00000539579 330 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN6P56747 NOP56P3-201ENST00000549457 385 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AC022146.1-201ENST00000595307 847 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 EIF1P6-201ENST00000600054 334 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 AC009032.1-201ENST00000617574 431 ntBASIC3.42□□□□□ -1.86
CLDN6P56747 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN6P56747 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN6P56747 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN6P56747 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CLDN6P56747 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms