Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.46□□□□□ -1.53
SMARCA2P51531 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMARCA2P51531 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMARCA2P51531 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMARCA2P51531 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.54
SMARCA2P51531 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SMARCA2P51531 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMARCA2P51531 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMARCA2P51531 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.46□□□□□ -1.54
SMARCA2P51531 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.46□□□□□ -1.54
SMARCA2P51531 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.46□□□□□ -1.54
SMARCA2P51531 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.46□□□□□ -1.54
SMARCA2P51531 HMGB1P50-201ENST00000605814 607 ntBASIC5.46□□□□□ -1.54
SMARCA2P51531 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.46□□□□□ -1.54
SMARCA2P51531 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.45□□□□□ -1.54
SMARCA2P51531 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SMARCA2P51531 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.45□□□□□ -1.54
SMARCA2P51531 SETP10-201ENST00000424368 814 ntBASIC5.45□□□□□ -1.54
SMARCA2P51531 AL450263.2-201ENST00000439400 589 ntBASIC5.45□□□□□ -1.54
SMARCA2P51531 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.45□□□□□ -1.54
SMARCA2P51531 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.45□□□□□ -1.54
SMARCA2P51531 AC034159.1-201ENST00000513885 583 ntBASIC5.45□□□□□ -1.54
SMARCA2P51531 AC009313.2-201ENST00000417893 1941 ntBASIC5.45□□□□□ -1.54
SMARCA2P51531 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
SMARCA2P51531 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA2P51531 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
SMARCA2P51531 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA2P51531 AC063976.3-201ENST00000426849 329 ntBASIC5.44□□□□□ -1.54
SMARCA2P51531 RPS20P32-201ENST00000456044 356 ntBASIC5.44□□□□□ -1.54
SMARCA2P51531 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.44□□□□□ -1.54
SMARCA2P51531 Y_RNA.676-201ENST00000516393 96 ntBASIC5.44□□□□□ -1.54
SMARCA2P51531 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA2P51531 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA2P51531 AC108206.1-201ENST00000570186 4159 ntBASIC5.44□□□□□ -1.54
SMARCA2P51531 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA2P51531 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA2P51531 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SMARCA2P51531 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA2P51531 AP003122.5-201ENST00000527668 3766 ntBASIC5.44□□□□□ -1.54
SMARCA2P51531 GCNT6-201ENST00000379591 934 ntBASIC5.43□□□□□ -1.54
SMARCA2P51531 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA2P51531 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.43□□□□□ -1.54
SMARCA2P51531 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA2P51531 RFPL4AP3-201ENST00000515267 345 ntBASIC5.43□□□□□ -1.54
SMARCA2P51531 MIR4425-201ENST00000580572 84 ntBASIC5.43□□□□□ -1.54
SMARCA2P51531 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMARCA2P51531 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA2P51531 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA2P51531 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SMARCA2P51531 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA2P51531 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SMARCA2P51531 AP002088.1-201ENST00000382740 395 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.42□□□□□ -1.54
SMARCA2P51531 MRPS33P4-201ENST00000434892 317 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 CST9LP2-201ENST00000437612 320 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 HMGB1P18-201ENST00000438801 619 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AC112653.1-201ENST00000443851 386 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA2P51531 MTCO3P16-201ENST00000454456 754 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 MIR2276-201ENST00000516886 89 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA2P51531 CYCSP39-201ENST00000565821 309 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AC244205.2-202ENST00000635781 342 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.42□□□□□ -1.54
SMARCA2P51531 OR52B1P-201ENST00000316506 909 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 RNU6-851P-201ENST00000384565 107 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AC114967.1-201ENST00000504890 259 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AP001207.2-201ENST00000519490 539 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 OR4C2P-201ENST00000530855 1064 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.42□□□□□ -1.54
SMARCA2P51531 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMARCA2P51531 AL034351.1-201ENST00000605288 668 ntBASIC5.42□□□□□ -1.54
SMARCA2P51531 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.42□□□□□ -1.54
SMARCA2P51531 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SMARCA2P51531 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 MIR30E-201ENST00000362104 92 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA2P51531 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA2P51531 PRDX3P4-201ENST00000470828 747 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.41□□□□□ -1.54
SMARCA2P51531 AC079600.2-201ENST00000550076 130 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.41□□□□□ -1.54
SMARCA2P51531 AL137072.1-201ENST00000603444 466 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 AL158196.1-201ENST00000616786 434 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMARCA2P51531 AL049780.3-201ENST00000624612 1583 ntBASIC5.41□□□□□ -1.54
SMARCA2P51531 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.4□□□□□ -1.54
SMARCA2P51531 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMARCA2P51531 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
SMARCA2P51531 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMARCA2P51531 SNORA9.2-201ENST00000365361 133 ntBASIC5.4□□□□□ -1.55
SMARCA2P51531 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.4□□□□□ -1.55
SMARCA2P51531 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.4□□□□□ -1.55
SMARCA2P51531 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.4□□□□□ -1.55
SMARCA2P51531 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.4□□□□□ -1.55
SMARCA2P51531 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.4□□□□□ -1.55
SMARCA2P51531 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SMARCA2P51531 AP002812.4-201ENST00000532139 286 ntBASIC5.4□□□□□ -1.55
SMARCA2P51531 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms