Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
APOBEC1P41238 AL391994.1-201ENST00000254724 282 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 SNRPEP3-201ENST00000338402 276 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 RNU6-253P-201ENST00000384730 105 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
APOBEC1P41238 SNORA11F-201ENST00000408237 128 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 USP9YP26-201ENST00000421008 661 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 NIPA2P1-201ENST00000426223 976 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC073335.1-201ENST00000427776 363 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC008065.1-201ENST00000428525 348 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.97□□□□□ -1.77
APOBEC1P41238 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 TRBV26-201ENST00000456572 344 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 RNU7-125P-201ENST00000458760 62 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 snoU13.1-201ENST00000459157 104 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC092757.1-201ENST00000467293 467 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 RN7SL810P-201ENST00000493031 276 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 RNU6-583P-201ENST00000516012 92 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 RNY4P37-201ENST00000516225 96 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 RNA5SP360-201ENST00000516555 118 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC100770.1-201ENST00000532310 322 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AL352979.3-201ENST00000553515 247 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC090888.1-201ENST00000561335 1141 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.97□□□□□ -1.77
APOBEC1P41238 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.97□□□□□ -1.77
APOBEC1P41238 MIR4715-201ENST00000584117 79 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC090616.2-202ENST00000584248 222 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AL008729.2-201ENST00000606393 473 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC079248.2-201ENST00000623779 326 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC010608.2-201ENST00000624830 470 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 MIR3974-201ENST00000637126 96 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 AC007671.2-201ENST00000637344 619 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
APOBEC1P41238 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.97□□□□□ -1.77
APOBEC1P41238 Z98755.1-201ENST00000407015 1384 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOBEC1P41238 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOBEC1P41238 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.97□□□□□ -1.77
APOBEC1P41238 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
APOBEC1P41238 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.97□□□□□ -1.77
APOBEC1P41238 AC025031.4-201ENST00000621248 3271 ntBASIC3.97□□□□□ -1.77
APOBEC1P41238 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
APOBEC1P41238 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOBEC1P41238 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
APOBEC1P41238 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOBEC1P41238 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
APOBEC1P41238 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
APOBEC1P41238 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
APOBEC1P41238 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.96□□□□□ -1.78
APOBEC1P41238 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.96□□□□□ -1.78
APOBEC1P41238 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
APOBEC1P41238 RNU6-1226P-201ENST00000384317 107 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 ATP5F1P4-201ENST00000397288 746 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 SNRPEP2-201ENST00000397592 279 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
APOBEC1P41238 BTBD10P2-201ENST00000404779 676 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 USP9YP33-201ENST00000412220 421 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.96□□□□□ -1.78
APOBEC1P41238 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.96□□□□□ -1.78
APOBEC1P41238 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.96□□□□□ -1.78
APOBEC1P41238 RPS27AP7-201ENST00000422792 455 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 RBMY1KP-201ENST00000423480 476 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 TXNL1P1-201ENST00000429528 554 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 USP9YP35-201ENST00000435696 412 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 AL357520.1-201ENST00000441557 453 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 VN1R10P-201ENST00000447106 875 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.96□□□□□ -1.78
APOBEC1P41238 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.96□□□□□ -1.78
APOBEC1P41238 RPL23AP35-201ENST00000451906 501 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.96□□□□□ -1.78
APOBEC1P41238 RN7SL738P-201ENST00000470264 297 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 RNF138P1-201ENST00000502765 546 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
APOBEC1P41238 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
APOBEC1P41238 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.96□□□□□ -1.78
APOBEC1P41238 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.96□□□□□ -1.78
APOBEC1P41238 MTCYBP37-201ENST00000510642 1133 ntBASIC3.96□□□□□ -1.78
APOBEC1P41238 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.96□□□□□ -1.78
APOBEC1P41238 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms