Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 ZNF734P-201ENST00000419494 1534 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD13P35453 AC097504.1-201ENST00000515103 2415 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD13P35453 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD13P35453 SNORD35B-201ENST00000363660 87 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 SNORD74.4-201ENST00000364129 80 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 SUGT1P1-201ENST00000379514 476 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 MT-TC-201ENST00000387405 66 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 SNORA3C-201ENST00000408792 125 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 MTCYBP24-201ENST00000420387 1106 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC007435.1-201ENST00000421086 415 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC093155.1-201ENST00000440164 826 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXD13P35453 COX6CP18-201ENST00000448769 222 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD13P35453 RPL38P1-201ENST00000460914 211 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC084024.2-201ENST00000503480 791 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 PRELID3BP7-201ENST00000503606 469 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD13P35453 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC027309.2-201ENST00000520566 192 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 OR7E13P-201ENST00000526052 910 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 YPEL5P3-201ENST00000547227 352 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXD13P35453 AC025627.2-201ENST00000576220 160 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.42□□□□□ -1.7
HOXD13P35453 AL355812.1-201ENST00000603215 216 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC008638.3-201ENST00000603341 463 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 RPP40P2-201ENST00000603596 712 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXD13P35453 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD13P35453 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HOXD13P35453 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD13P35453 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD13P35453 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
HOXD13P35453 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD13P35453 RLIMP1-201ENST00000339626 1680 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HOXD13P35453 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HOXD13P35453 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD13P35453 RNA5SP399-201ENST00000364003 117 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RNVU1-3-201ENST00000364313 161 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 snoZ40.1-201ENST00000364540 72 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HOXD13P35453 AL022722.2-201ENST00000402519 180 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RNU6-584P-201ENST00000410350 95 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 MTATP6P20-201ENST00000414147 562 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC092634.6-201ENST00000418558 192 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC005517.2-201ENST00000424673 553 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD13P35453 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 FABP3P2-201ENST00000453169 399 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.41□□□□□ -1.7
HOXD13P35453 RPL23AP44-201ENST00000482216 473 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RPL7P24-201ENST00000493052 752 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RPL29P14-201ENST00000495837 428 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 TMEM248P1-201ENST00000510579 951 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.41□□□□□ -1.7
HOXD13P35453 MTCO1P30-201ENST00000515244 580 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD13P35453 RN7SKP157-201ENST00000516174 282 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 SNORA48.10-201ENST00000516965 160 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD13P35453 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 AP000790.1-201ENST00000528891 737 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD13P35453 RN7SL339P-201ENST00000580597 296 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
HOXD13P35453 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD13P35453 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 AC068790.5-201ENST00000602741 355 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC092954.1-201ENST00000609121 445 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 AC004943.3-201ENST00000624116 600 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 RNA5SP196-201ENST00000625967 102 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 IQCB2P-201ENST00000401788 1633 ntBASIC4.41□□□□□ -1.7
HOXD13P35453 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms