Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC135001.1-201ENST00000544546 283 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.75□□□□□ -1.65
CLIP1P30622 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.75□□□□□ -1.65
CLIP1P30622 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.75□□□□□ -1.65
CLIP1P30622 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.75□□□□□ -1.65
CLIP1P30622 TTC39DP-201ENST00000416781 1688 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP1P30622 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 U3.11-201ENST00000364476 212 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 DUTP6-201ENST00000425573 462 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP1P30622 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.74□□□□□ -1.65
CLIP1P30622 AC105402.2-201ENST00000438503 358 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 AC112653.1-201ENST00000443851 386 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP1P30622 RN7SL442P-201ENST00000473804 320 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP1P30622 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.74□□□□□ -1.65
CLIP1P30622 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP1P30622 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 AP000919.1-202ENST00000581139 1264 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP1P30622 AL356490.1-201ENST00000623079 479 ntBASIC4.74□□□□□ -1.65
CLIP1P30622 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP1P30622 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CLIP1P30622 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.74□□□□□ -1.65
CLIP1P30622 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP1P30622 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP1P30622 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP1P30622 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLIP1P30622 AC107027.3-201ENST00000565095 3473 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.73□□□□□ -1.65
CLIP1P30622 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
CLIP1P30622 NACA3P-201ENST00000359690 648 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP1P30622 RPL32P35-201ENST00000415214 394 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP1P30622 AL445528.1-201ENST00000426330 420 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 RPL7L1P1-201ENST00000448259 785 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 AC112184.1-201ENST00000505179 312 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP1P30622 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP1P30622 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP1P30622 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLIP1P30622 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.73□□□□□ -1.65
CLIP1P30622 AC107081.3-201ENST00000612715 2034 ntBASIC4.73□□□□□ -1.65
CLIP1P30622 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP1P30622 AC062016.1-201ENST00000355719 319 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 U3.6-201ENST00000363622 211 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 RNA5SP293-201ENST00000410527 113 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 AC245291.1-201ENST00000419501 328 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLIP1P30622 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP1P30622 AL160175.1-201ENST00000428124 247 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP1P30622 AC083906.5-201ENST00000503722 328 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP1P30622 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP1P30622 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP1P30622 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 AP003485.2-201ENST00000623636 610 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 GABRG2-229ENST00000641017 3628 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CLIP1P30622 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLIP1P30622 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP1P30622 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP1P30622 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP1P30622 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP1P30622 AC118465.1-201ENST00000513820 1271 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLIP1P30622 AC007566.2-201ENST00000603642 413 ntBASIC4.72□□□□□ -1.65
CLIP1P30622 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLIP1P30622 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.71□□□□□ -1.65
CLIP1P30622 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLIP1P30622 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP1P30622 SNORA9.2-201ENST00000365361 133 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 SNORA18.3-201ENST00000384122 132 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 SNORA46-201ENST00000384762 135 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 RPS24P13-201ENST00000442520 397 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP1P30622 RPL31P50-201ENST00000471002 296 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 RN7SL429P-201ENST00000479090 223 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 RN7SL489P-201ENST00000486185 223 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 RN7SL327P-201ENST00000488659 223 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.71□□□□□ -1.66
CLIP1P30622 AC010306.1-201ENST00000523223 1117 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 AL390838.2-201ENST00000602394 274 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 ATP1B3P1-201ENST00000605365 821 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 RN7SL853P-201ENST00000617250 223 ntBASIC4.71□□□□□ -1.66
CLIP1P30622 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP1P30622 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP1P30622 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP1P30622 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP1P30622 AC011503.2-201ENST00000594230 1500 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms