Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC068587.1-201ENST00000483613 781 ntBASIC4.55□□□□□ -1.68
BDNFP23560 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BDNFP23560 AC004062.1-201ENST00000509926 645 ntBASIC4.55□□□□□ -1.68
BDNFP23560 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.55□□□□□ -1.68
BDNFP23560 AC010625.1-201ENST00000511296 403 ntBASIC4.55□□□□□ -1.68
BDNFP23560 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.55□□□□□ -1.68
BDNFP23560 IGKV2D-23-201ENST00000518179 286 ntBASIC4.55□□□□□ -1.68
BDNFP23560 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
BDNFP23560 AP003730.1-201ENST00000524605 285 ntBASIC4.55□□□□□ -1.68
BDNFP23560 AC090502.2-201ENST00000549267 280 ntBASIC4.55□□□□□ -1.68
BDNFP23560 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.55□□□□□ -1.68
BDNFP23560 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.55□□□□□ -1.68
BDNFP23560 AP001029.3-201ENST00000588063 596 ntBASIC4.55□□□□□ -1.68
BDNFP23560 AC010738.1-201ENST00000604970 987 ntBASIC4.55□□□□□ -1.68
BDNFP23560 OR1S1-201ENST00000624470 978 ntBASIC4.55□□□□□ -1.68
BDNFP23560 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.55□□□□□ -1.68
BDNFP23560 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.55□□□□□ -1.68
BDNFP23560 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.55□□□□□ -1.68
BDNFP23560 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.55□□□□□ -1.68
BDNFP23560 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.55□□□□□ -1.68
BDNFP23560 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BDNFP23560 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.55□□□□□ -1.68
BDNFP23560 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.55□□□□□ -1.68
BDNFP23560 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BDNFP23560 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.54□□□□□ -1.68
BDNFP23560 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
BDNFP23560 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
BDNFP23560 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BDNFP23560 RNU1-14P-201ENST00000362759 152 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AP000567.1-201ENST00000406413 156 ntBASIC4.54□□□□□ -1.68
BDNFP23560 RNU4-65P-201ENST00000410473 140 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 AC012065.2-201ENST00000421295 375 ntBASIC4.54□□□□□ -1.68
BDNFP23560 RPF2P1-201ENST00000424137 906 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AC017083.1-201ENST00000428093 483 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.54□□□□□ -1.68
BDNFP23560 SEPT7P5-201ENST00000434048 306 ntBASIC4.54□□□□□ -1.68
BDNFP23560 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.54□□□□□ -1.68
BDNFP23560 AL662791.1-201ENST00000441992 928 ntBASIC4.54□□□□□ -1.68
BDNFP23560 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.54□□□□□ -1.68
BDNFP23560 HMGN2P16-201ENST00000456802 261 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AC010469.1-201ENST00000463864 576 ntBASIC4.54□□□□□ -1.68
BDNFP23560 RPL23AP65-201ENST00000475608 468 ntBASIC4.54□□□□□ -1.68
BDNFP23560 UBE2CP3-201ENST00000502715 450 ntBASIC4.54□□□□□ -1.68
BDNFP23560 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.54□□□□□ -1.68
BDNFP23560 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 MTND2P7-201ENST00000521337 640 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AP003102.1-201ENST00000525638 661 ntBASIC4.54□□□□□ -1.68
BDNFP23560 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BDNFP23560 AC091515.1-201ENST00000548110 679 ntBASIC4.54□□□□□ -1.68
BDNFP23560 EEF1B2P4-201ENST00000551398 348 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AC025884.1-201ENST00000556034 378 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.54□□□□□ -1.68
BDNFP23560 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.54□□□□□ -1.68
BDNFP23560 AC073387.2-201ENST00000604797 784 ntBASIC4.54□□□□□ -1.68
BDNFP23560 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.54□□□□□ -1.68
BDNFP23560 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 AC140113.4-201ENST00000622087 222 ntBASIC4.54□□□□□ -1.68
BDNFP23560 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.54□□□□□ -1.68
BDNFP23560 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
BDNFP23560 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BDNFP23560 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
BDNFP23560 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
BDNFP23560 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
BDNFP23560 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BDNFP23560 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
BDNFP23560 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BDNFP23560 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.53□□□□□ -1.68
BDNFP23560 LARP1BP1-201ENST00000506036 1359 ntBASIC4.53□□□□□ -1.68
BDNFP23560 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BDNFP23560 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
BDNFP23560 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BDNFP23560 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BDNFP23560 SNORA70C-201ENST00000384538 135 ntBASIC4.53□□□□□ -1.68
BDNFP23560 RNU6-878P-201ENST00000384578 110 ntBASIC4.53□□□□□ -1.68
BDNFP23560 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
BDNFP23560 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
BDNFP23560 RNU6-1000P-201ENST00000391066 106 ntBASIC4.53□□□□□ -1.68
BDNFP23560 PTMAP5-201ENST00000393073 333 ntBASIC4.53□□□□□ -1.68
BDNFP23560 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.53□□□□□ -1.68
BDNFP23560 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.53□□□□□ -1.68
BDNFP23560 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.53□□□□□ -1.68
BDNFP23560 EIF1P3-201ENST00000423841 334 ntBASIC4.53□□□□□ -1.68
BDNFP23560 USP12PY-201ENST00000427677 1064 ntBASIC4.53□□□□□ -1.68
BDNFP23560 AC004975.1-201ENST00000428733 208 ntBASIC4.53□□□□□ -1.68
BDNFP23560 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.53□□□□□ -1.68
BDNFP23560 GSTA7P-201ENST00000438425 448 ntBASIC4.53□□□□□ -1.68
BDNFP23560 USP9YP22-201ENST00000438971 294 ntBASIC4.53□□□□□ -1.68
BDNFP23560 SNORA71B-202ENST00000439232 272 ntBASIC4.53□□□□□ -1.68
BDNFP23560 MTND2P19-201ENST00000449129 1012 ntBASIC4.53□□□□□ -1.68
BDNFP23560 NUTF2P7-201ENST00000453086 375 ntBASIC4.53□□□□□ -1.68
BDNFP23560 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.53□□□□□ -1.68
BDNFP23560 AC069306.1-201ENST00000507006 843 ntBASIC4.53□□□□□ -1.68
BDNFP23560 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BDNFP23560 AC021146.3-201ENST00000511911 260 ntBASIC4.53□□□□□ -1.68
BDNFP23560 KCTD9P2-201ENST00000512203 1013 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms