Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.05□□□□□ -1.92
VCANP13611 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VCANP13611 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.05□□□□□ -1.92
VCANP13611 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.05□□□□□ -1.92
VCANP13611 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 AC011266.1-201ENST00000624119 3569 ntBASIC3.04□□□□□ -1.92
VCANP13611 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.04□□□□□ -1.92
VCANP13611 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.04□□□□□ -1.92
VCANP13611 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 RPL7P52-201ENST00000449200 742 ntBASIC3.04□□□□□ -1.92
VCANP13611 SEPT14P1-201ENST00000458703 648 ntBASIC3.04□□□□□ -1.92
VCANP13611 RNA5SP103-201ENST00000459503 118 ntBASIC3.04□□□□□ -1.92
VCANP13611 HMGB3P14-201ENST00000494195 599 ntBASIC3.04□□□□□ -1.92
VCANP13611 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.04□□□□□ -1.92
VCANP13611 RPP40P2-201ENST00000603596 712 ntBASIC3.04□□□□□ -1.92
VCANP13611 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
VCANP13611 OR10AB1P-202ENST00000641219 1686 ntBASIC3.04□□□□□ -1.92
VCANP13611 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 RPL21P132-201ENST00000331267 462 ntBASIC3.04□□□□□ -1.92
VCANP13611 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.04□□□□□ -1.92
VCANP13611 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.04□□□□□ -1.92
VCANP13611 AC074367.1-201ENST00000438685 1125 ntBASIC3.04□□□□□ -1.92
VCANP13611 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 AC009063.1-201ENST00000563342 702 ntBASIC3.04□□□□□ -1.92
VCANP13611 AL360085.1-201ENST00000604713 532 ntBASIC3.04□□□□□ -1.92
VCANP13611 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 MIR6779-201ENST00000617283 64 ntBASIC3.04□□□□□ -1.92
VCANP13611 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.04□□□□□ -1.92
VCANP13611 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VCANP13611 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VCANP13611 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
VCANP13611 MIR518E-201ENST00000385252 88 ntBASIC3.03□□□□□ -1.92
VCANP13611 IFNNP1-201ENST00000429219 553 ntBASIC3.03□□□□□ -1.92
VCANP13611 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.03□□□□□ -1.92
VCANP13611 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.03□□□□□ -1.92
VCANP13611 AC006020.1-201ENST00000420179 1854 ntBASIC3.03□□□□□ -1.92
VCANP13611 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.03□□□□□ -1.92
VCANP13611 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.03□□□□□ -1.92
VCANP13611 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.03□□□□□ -1.92
VCANP13611 OR5H5P-201ENST00000503164 928 ntBASIC3.03□□□□□ -1.92
VCANP13611 AC111000.2-201ENST00000507775 550 ntBASIC3.03□□□□□ -1.92
VCANP13611 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.03□□□□□ -1.92
VCANP13611 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.03□□□□□ -1.92
VCANP13611 AC009163.5-201ENST00000575421 637 ntBASIC3.03□□□□□ -1.92
VCANP13611 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.03□□□□□ -1.92
VCANP13611 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.03□□□□□ -1.92
VCANP13611 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VCANP13611 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
VCANP13611 SNORA25.9-201ENST00000365087 128 ntBASIC3.03□□□□□ -1.93
VCANP13611 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.03□□□□□ -1.93
VCANP13611 SNORA17.3-201ENST00000391159 129 ntBASIC3.03□□□□□ -1.93
VCANP13611 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.03□□□□□ -1.93
VCANP13611 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.03□□□□□ -1.93
VCANP13611 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.03□□□□□ -1.93
VCANP13611 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.93
VCANP13611 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
VCANP13611 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VCANP13611 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 DNAJC19P1-201ENST00000455312 319 ntBASIC3.02□□□□□ -1.93
VCANP13611 AC090695.1-201ENST00000561269 1222 ntBASIC3.02□□□□□ -1.93
VCANP13611 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.02□□□□□ -1.93
VCANP13611 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VCANP13611 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VCANP13611 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 MFSD8-233ENST00000641482 4860 ntBASIC3.02□□□□□ -1.93
VCANP13611 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VCANP13611 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VCANP13611 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 RNA5SP425-201ENST00000410336 112 ntBASIC3.02□□□□□ -1.93
VCANP13611 AC012065.2-201ENST00000421295 375 ntBASIC3.02□□□□□ -1.93
VCANP13611 MTCO1P42-201ENST00000457379 726 ntBASIC3.02□□□□□ -1.93
VCANP13611 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.02□□□□□ -1.93
VCANP13611 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.02□□□□□ -1.93
VCANP13611 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 OR7M1P-201ENST00000608946 533 ntBASIC3.02□□□□□ -1.93
VCANP13611 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCANP13611 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
VCANP13611 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.01□□□□□ -1.93
VCANP13611 Z98742.3-201ENST00000418637 326 ntBASIC3.01□□□□□ -1.93
VCANP13611 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.01□□□□□ -1.93
VCANP13611 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.01□□□□□ -1.93
VCANP13611 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.01□□□□□ -1.93
VCANP13611 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
VCANP13611 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms