Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC004817.2-201ENST00000561794 651 ntBASIC6.06□□□□□ -1.44
RARAP10276 AC009962.1-201ENST00000567327 3813 ntBASIC6.06□□□□□ -1.44
RARAP10276 MIR4310-201ENST00000582950 57 ntBASIC6.06□□□□□ -1.44
RARAP10276 AL355598.1-201ENST00000604169 202 ntBASIC6.06□□□□□ -1.44
RARAP10276 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.06□□□□□ -1.44
RARAP10276 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 MIR6793-201ENST00000612376 63 ntBASIC6.06□□□□□ -1.44
RARAP10276 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.06□□□□□ -1.44
RARAP10276 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.06□□□□□ -1.44
RARAP10276 AC087588.2-201ENST00000617667 426 ntBASIC6.06□□□□□ -1.44
RARAP10276 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 AC135068.12-201ENST00000637370 931 ntBASIC6.06□□□□□ -1.44
RARAP10276 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.06□□□□□ -1.44
RARAP10276 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RARAP10276 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RARAP10276 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
RARAP10276 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RARAP10276 AC004656.1-201ENST00000568479 4951 ntBASIC6.06□□□□□ -1.44
RARAP10276 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
RARAP10276 MTND4P14-201ENST00000435799 1354 ntBASIC6.06□□□□□ -1.44
RARAP10276 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 VPS35P1-201ENST00000563400 1518 ntBASIC6.05□□□□□ -1.44
RARAP10276 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 MTND5P33-201ENST00000571250 1450 ntBASIC6.05□□□□□ -1.44
RARAP10276 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 AL161781.1-201ENST00000354277 403 ntBASIC6.05□□□□□ -1.44
RARAP10276 RNU1-85P-201ENST00000364127 164 ntBASIC6.05□□□□□ -1.44
RARAP10276 RNU4-48P-201ENST00000365559 182 ntBASIC6.05□□□□□ -1.44
RARAP10276 SNORA51.6-201ENST00000384151 125 ntBASIC6.05□□□□□ -1.44
RARAP10276 MIR568-201ENST00000385036 95 ntBASIC6.05□□□□□ -1.44
RARAP10276 RNU6-308P-201ENST00000390957 107 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC016769.3-201ENST00000396562 315 ntBASIC6.05□□□□□ -1.44
RARAP10276 PRRC2CP1-201ENST00000404428 159 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC009310.1-201ENST00000414414 451 ntBASIC6.05□□□□□ -1.44
RARAP10276 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.05□□□□□ -1.44
RARAP10276 AC234781.4-201ENST00000419384 244 ntBASIC6.05□□□□□ -1.44
RARAP10276 BX284632.2-201ENST00000421091 399 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC005517.2-201ENST00000424673 553 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.05□□□□□ -1.44
RARAP10276 AC137499.1-201ENST00000427602 88 ntBASIC6.05□□□□□ -1.44
RARAP10276 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 RPL34P6-201ENST00000432390 345 ntBASIC6.05□□□□□ -1.44
RARAP10276 SNRPEP4-201ENST00000435815 279 ntBASIC6.05□□□□□ -1.44
RARAP10276 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.05□□□□□ -1.44
RARAP10276 AL359955.2-201ENST00000445380 353 ntBASIC6.05□□□□□ -1.44
RARAP10276 RPS4XP14-201ENST00000493072 781 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.05□□□□□ -1.44
RARAP10276 RNA5SP473-201ENST00000516402 125 ntBASIC6.05□□□□□ -1.44
RARAP10276 AP000907.2-201ENST00000530827 353 ntBASIC6.05□□□□□ -1.44
RARAP10276 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 AC063950.1-201ENST00000552036 308 ntBASIC6.05□□□□□ -1.44
RARAP10276 NCAPGP2-201ENST00000557911 754 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.05□□□□□ -1.44
RARAP10276 MIR3146-201ENST00000580367 79 ntBASIC6.05□□□□□ -1.44
RARAP10276 MIR3149-201ENST00000584629 83 ntBASIC6.05□□□□□ -1.44
RARAP10276 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.05□□□□□ -1.44
RARAP10276 HSPE1P14-201ENST00000605812 302 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC004908.2-201ENST00000609090 574 ntBASIC6.05□□□□□ -1.44
RARAP10276 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 uc_338.22-201ENST00000622722 187 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC073592.6-201ENST00000624271 415 ntBASIC6.05□□□□□ -1.44
RARAP10276 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.05□□□□□ -1.44
RARAP10276 AC119674.1-207ENST00000641355 633 ntBASIC6.05□□□□□ -1.44
RARAP10276 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
RARAP10276 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RARAP10276 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RARAP10276 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.04□□□□□ -1.44
RARAP10276 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.04□□□□□ -1.44
RARAP10276 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
RARAP10276 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.04□□□□□ -1.44
RARAP10276 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RARAP10276 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RARAP10276 AC067945.1-201ENST00000342609 618 ntBASIC6.04□□□□□ -1.44
RARAP10276 RNA5SP273-201ENST00000362484 113 ntBASIC6.04□□□□□ -1.44
RARAP10276 Y_RNA.339-201ENST00000365325 102 ntBASIC6.04□□□□□ -1.44
RARAP10276 RN7SKP186-201ENST00000365371 303 ntBASIC6.04□□□□□ -1.44
RARAP10276 Y_RNA.367-201ENST00000365544 101 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms