Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC004987.3-201ENST00000413879 771 ntBASIC4.41□□□□□ -1.7
RB1P06400 RPS3AP37-201ENST00000419176 745 ntBASIC4.41□□□□□ -1.7
RB1P06400 RBMY1KP-201ENST00000423480 476 ntBASIC4.41□□□□□ -1.7
RB1P06400 DPRXP1-201ENST00000426312 460 ntBASIC4.41□□□□□ -1.7
RB1P06400 Z93242.1-201ENST00000427102 353 ntBASIC4.41□□□□□ -1.7
RB1P06400 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.41□□□□□ -1.7
RB1P06400 ELOCP6-201ENST00000429066 328 ntBASIC4.41□□□□□ -1.7
RB1P06400 USP9YP24-201ENST00000434374 697 ntBASIC4.41□□□□□ -1.7
RB1P06400 USP9YP17-201ENST00000444617 696 ntBASIC4.41□□□□□ -1.7
RB1P06400 AC079776.3-201ENST00000450665 370 ntBASIC4.41□□□□□ -1.7
RB1P06400 HMGN3P1-201ENST00000453847 193 ntBASIC4.41□□□□□ -1.7
RB1P06400 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.41□□□□□ -1.7
RB1P06400 ELOCP12-201ENST00000458706 328 ntBASIC4.41□□□□□ -1.7
RB1P06400 RPL7P49-201ENST00000471402 708 ntBASIC4.41□□□□□ -1.7
RB1P06400 VPS26AP1-201ENST00000483197 979 ntBASIC4.41□□□□□ -1.7
RB1P06400 AC104164.2-201ENST00000496953 495 ntBASIC4.41□□□□□ -1.7
RB1P06400 DSTNP2-201ENST00000504533 515 ntBASIC4.41□□□□□ -1.7
RB1P06400 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.41□□□□□ -1.7
RB1P06400 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.41□□□□□ -1.7
RB1P06400 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.41□□□□□ -1.7
RB1P06400 MTND2P26-201ENST00000528255 1029 ntBASIC4.41□□□□□ -1.7
RB1P06400 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 AP001317.1-201ENST00000531194 960 ntBASIC4.41□□□□□ -1.7
RB1P06400 OR8K4P-201ENST00000534608 872 ntBASIC4.41□□□□□ -1.7
RB1P06400 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.41□□□□□ -1.7
RB1P06400 AL035411.2-201ENST00000604022 421 ntBASIC4.41□□□□□ -1.7
RB1P06400 AC019176.2-201ENST00000611579 315 ntBASIC4.41□□□□□ -1.7
RB1P06400 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 AC005086.4-201ENST00000623065 213 ntBASIC4.41□□□□□ -1.7
RB1P06400 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.41□□□□□ -1.7
RB1P06400 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 AC068620.4-201ENST00000636730 1182 ntBASIC4.41□□□□□ -1.7
RB1P06400 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RB1P06400 AL133412.1-201ENST00000380194 2992 ntBASIC4.41□□□□□ -1.7
RB1P06400 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RB1P06400 NOL8P1-201ENST00000508336 3529 ntBASIC4.41□□□□□ -1.7
RB1P06400 AC012020.1-201ENST00000624541 1728 ntBASIC4.41□□□□□ -1.7
RB1P06400 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RB1P06400 AP005901.5-201ENST00000545779 1796 ntBASIC4.4□□□□□ -1.7
RB1P06400 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.7
RB1P06400 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RB1P06400 RNA5SP124-201ENST00000362739 110 ntBASIC4.4□□□□□ -1.71
RB1P06400 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RB1P06400 SNORA40.2-201ENST00000390847 128 ntBASIC4.4□□□□□ -1.71
RB1P06400 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
RB1P06400 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 AC008065.1-201ENST00000428525 348 ntBASIC4.4□□□□□ -1.71
RB1P06400 IFNNP1-201ENST00000429219 553 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.4□□□□□ -1.71
RB1P06400 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RB1P06400 GTF2IP7-202ENST00000436677 309 ntBASIC4.4□□□□□ -1.71
RB1P06400 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.4□□□□□ -1.71
RB1P06400 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 AL589880.1-201ENST00000448271 287 ntBASIC4.4□□□□□ -1.71
RB1P06400 COX6CP18-201ENST00000448769 222 ntBASIC4.4□□□□□ -1.71
RB1P06400 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RB1P06400 ZNF886P-201ENST00000450781 723 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC092155.2-201ENST00000454675 477 ntBASIC4.4□□□□□ -1.71
RB1P06400 RPL23AP44-201ENST00000482216 473 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC134050.1-201ENST00000495088 933 ntBASIC4.4□□□□□ -1.71
RB1P06400 RPS4XP18-201ENST00000495480 763 ntBASIC4.4□□□□□ -1.71
RB1P06400 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.4□□□□□ -1.71
RB1P06400 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.4□□□□□ -1.71
RB1P06400 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.4□□□□□ -1.71
RB1P06400 AC113347.3-201ENST00000509113 148 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC026726.1-201ENST00000512859 601 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.4□□□□□ -1.71
RB1P06400 PTP4A1P6-201ENST00000531034 478 ntBASIC4.4□□□□□ -1.71
RB1P06400 AP000619.3-201ENST00000535634 1127 ntBASIC4.4□□□□□ -1.71
RB1P06400 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 CYCSP30-201ENST00000546447 172 ntBASIC4.4□□□□□ -1.71
RB1P06400 CCNG2P1-201ENST00000549521 1000 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 MTCYBP28-201ENST00000566728 1132 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.4□□□□□ -1.71
RB1P06400 MTND3P13-201ENST00000574391 343 ntBASIC4.4□□□□□ -1.71
RB1P06400 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.4□□□□□ -1.71
RB1P06400 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.4□□□□□ -1.71
RB1P06400 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.4□□□□□ -1.71
RB1P06400 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.4□□□□□ -1.71
RB1P06400 AC084757.4-201ENST00000616350 526 ntBASIC4.4□□□□□ -1.71
RB1P06400 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.4□□□□□ -1.71
RB1P06400 AL078595.3-201ENST00000623815 1166 ntBASIC4.4□□□□□ -1.71
RB1P06400 LINC02211-204ENST00000642024 1070 ntBASIC4.4□□□□□ -1.71
RB1P06400 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RB1P06400 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RB1P06400 MTND5P31-201ENST00000419366 1374 ntBASIC4.4□□□□□ -1.71
RB1P06400 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.39□□□□□ -1.71
RB1P06400 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
RB1P06400 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms