Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.85□□□□□ -2.11
APOBP04114 LINC02471-203ENST00000641941 4752 ntBASIC1.85□□□□□ -2.11
APOBP04114 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBP04114 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
APOBP04114 AC063923.1-201ENST00000478982 1619 ntBASIC1.85□□□□□ -2.11
APOBP04114 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 NCAPGP1-201ENST00000505112 1814 ntBASIC1.85□□□□□ -2.11
APOBP04114 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBP04114 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
APOBP04114 MIR196B-201ENST00000384852 84 ntBASIC1.85□□□□□ -2.11
APOBP04114 RPS24P13-201ENST00000442520 397 ntBASIC1.85□□□□□ -2.11
APOBP04114 RPL31P13-201ENST00000484151 370 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 COX6CP8-201ENST00000522620 226 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC1.85□□□□□ -2.11
APOBP04114 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBP04114 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
APOBP04114 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
APOBP04114 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBP04114 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.85□□□□□ -2.11
APOBP04114 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 MIR9-1-201ENST00000385198 89 ntBASIC1.85□□□□□ -2.11
APOBP04114 RPS26P47-201ENST00000427219 348 ntBASIC1.85□□□□□ -2.11
APOBP04114 MRPS31P2-201ENST00000451581 518 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC021205.1-201ENST00000468797 348 ntBASIC1.85□□□□□ -2.11
APOBP04114 RPS26P3-201ENST00000470205 348 ntBASIC1.85□□□□□ -2.11
APOBP04114 RPL23AP71-201ENST00000470966 469 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC004057.1-201ENST00000485827 348 ntBASIC1.85□□□□□ -2.11
APOBP04114 RPL23AP73-201ENST00000492507 471 ntBASIC1.85□□□□□ -2.11
APOBP04114 HIGD1AP13-201ENST00000509878 289 ntBASIC1.85□□□□□ -2.11
APOBP04114 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 RFPL4AP3-201ENST00000515267 345 ntBASIC1.85□□□□□ -2.11
APOBP04114 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC1.85□□□□□ -2.11
APOBP04114 ATP5F1P7-201ENST00000567330 760 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC015911.5-201ENST00000587076 451 ntBASIC1.85□□□□□ -2.11
APOBP04114 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC1.85□□□□□ -2.11
APOBP04114 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBP04114 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
APOBP04114 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 RPS12P5-201ENST00000423449 371 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.84□□□□□ -2.11
APOBP04114 RPL7L1P1-201ENST00000448259 785 ntBASIC1.84□□□□□ -2.11
APOBP04114 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.84□□□□□ -2.11
APOBP04114 RNA5SP24-201ENST00000516478 95 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.84□□□□□ -2.11
APOBP04114 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 AC026790.2-201ENST00000606282 430 ntBASIC1.84□□□□□ -2.11
APOBP04114 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.84□□□□□ -2.11
APOBP04114 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
APOBP04114 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.84□□□□□ -2.11
APOBP04114 AL356057.3-201ENST00000402607 340 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.84□□□□□ -2.11
APOBP04114 ISCA1P6-201ENST00000427740 390 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.84□□□□□ -2.11
APOBP04114 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC1.84□□□□□ -2.11
APOBP04114 HNRNPKP5-201ENST00000515300 253 ntBASIC1.84□□□□□ -2.11
APOBP04114 SULT1C2P2-201ENST00000562517 294 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.84□□□□□ -2.11
APOBP04114 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
APOBP04114 MIR4727-201ENST00000622232 55 ntBASIC1.84□□□□□ -2.11
APOBP04114 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
APOBP04114 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
APOBP04114 HSPA8P4-201ENST00000511877 1920 ntBASIC1.84□□□□□ -2.11
APOBP04114 MIR26A1-201ENST00000362205 77 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC099063.2-201ENST00000446360 662 ntBASIC1.84□□□□□ -2.11
APOBP04114 EEF1B2P7-201ENST00000451177 676 ntBASIC1.84□□□□□ -2.11
APOBP04114 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1.84□□□□□ -2.11
APOBP04114 AC096644.4-201ENST00000563417 2912 ntBASIC1.84□□□□□ -2.12
APOBP04114 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
APOBP04114 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.84□□□□□ -2.12
APOBP04114 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.12
APOBP04114 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
APOBP04114 ZNF658B-202ENST00000615961 3375 ntBASIC1.84□□□□□ -2.12
APOBP04114 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.84□□□□□ -2.12
APOBP04114 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
APOBP04114 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
APOBP04114 RNU6-851P-201ENST00000384565 107 ntBASIC1.84□□□□□ -2.12
APOBP04114 AL121834.1-202ENST00000404494 277 ntBASIC1.84□□□□□ -2.12
APOBP04114 RNU2-52P-201ENST00000410680 190 ntBASIC1.84□□□□□ -2.12
APOBP04114 TRGV5P-201ENST00000419915 354 ntBASIC1.84□□□□□ -2.12
APOBP04114 GLRXP1-201ENST00000423261 334 ntBASIC1.84□□□□□ -2.12
APOBP04114 AC090525.1-201ENST00000479116 478 ntBASIC1.84□□□□□ -2.12
APOBP04114 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.84□□□□□ -2.12
APOBP04114 RMST_8.1-201ENST00000610287 165 ntBASIC1.84□□□□□ -2.12
APOBP04114 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
APOBP04114 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.84□□□□□ -2.12
APOBP04114 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
APOBP04114 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
APOBP04114 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
APOBP04114 RNA5SP289-201ENST00000362332 137 ntBASIC1.83□□□□□ -2.12
APOBP04114 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
APOBP04114 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms