Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP002001.2-201ENST00000529025 1469 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFBP01127 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDGFBP01127 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.98□□□□□ -1.77
PDGFBP01127 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFBP01127 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFBP01127 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 RNU6-1151P-201ENST00000384684 107 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDGFBP01127 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDGFBP01127 AP002784.2-201ENST00000397300 549 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFBP01127 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 AL512637.2-201ENST00000431287 1256 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AL645931.1-201ENST00000439737 410 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFBP01127 ARL4AP3-201ENST00000441452 574 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AL590399.6-201ENST00000446396 307 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 RN7SL601P-201ENST00000471221 293 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC078817.1-201ENST00000492623 435 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.98□□□□□ -1.77
PDGFBP01127 TMEM248P1-201ENST00000510579 951 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC021146.3-201ENST00000511911 260 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 RNU7-143P-201ENST00000516781 65 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 OR4R3P-201ENST00000525084 838 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC124293.1-201ENST00000530034 493 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AP000916.1-201ENST00000533869 835 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFBP01127 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 MTCYBP28-201ENST00000566728 1132 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFBP01127 AC007566.2-201ENST00000603642 413 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 BNIP3P4-201ENST00000604946 565 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC140113.4-201ENST00000622087 222 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC068620.4-201ENST00000636730 1182 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC119674.1-207ENST00000641355 633 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDGFBP01127 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFBP01127 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFBP01127 MTND4P8-201ENST00000514997 1362 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 KPNA2P2-201ENST00000419546 1489 ntBASIC3.98□□□□□ -1.77
PDGFBP01127 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.97□□□□□ -1.77
PDGFBP01127 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.97□□□□□ -1.77
PDGFBP01127 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.97□□□□□ -1.77
PDGFBP01127 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.97□□□□□ -1.77
PDGFBP01127 AC016716.1-201ENST00000265882 708 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PDGFBP01127 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 RPL7P60-201ENST00000397636 735 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 HMGB3P19-201ENST00000403971 560 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AL355379.1-201ENST00000405542 640 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.97□□□□□ -1.77
PDGFBP01127 RPL31P2-201ENST00000413849 377 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 RPS7P15-201ENST00000415804 584 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.97□□□□□ -1.77
PDGFBP01127 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.97□□□□□ -1.77
PDGFBP01127 RPS26P2-201ENST00000440331 348 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 RPL21P23-201ENST00000446654 460 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 TVP23BP2-201ENST00000455082 615 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 RPL36AP13-201ENST00000457490 317 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC008155.2-201ENST00000464337 397 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC005726.1-201ENST00000494679 427 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 SETP14-201ENST00000497538 873 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.97□□□□□ -1.77
PDGFBP01127 AC112198.4-201ENST00000515450 351 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.97□□□□□ -1.77
PDGFBP01127 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.97□□□□□ -1.77
PDGFBP01127 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.97□□□□□ -1.77
PDGFBP01127 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.97□□□□□ -1.77
PDGFBP01127 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PDGFBP01127 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.97□□□□□ -1.77
PDGFBP01127 MIR4504-201ENST00000577413 92 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC012417.1-201ENST00000582307 1039 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.97□□□□□ -1.77
PDGFBP01127 VN1R79P-201ENST00000593540 513 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AL139286.1-201ENST00000604465 483 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AL353726.1-201ENST00000614041 1000 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC243312.2-201ENST00000623340 601 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 AC019278.1-201ENST00000623516 479 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PDGFBP01127 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PDGFBP01127 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PDGFBP01127 AC095050.2-201ENST00000510748 1458 ntBASIC3.97□□□□□ -1.77
PDGFBP01127 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms