Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PRKNO60260 ZNF542P-204ENST00000482727 1305 ntBASIC3.91□□□□□ -1.78
PRKNO60260 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 Z82217.1-201ENST00000625157 8149 ntBASIC3.91□□□□□ -1.78
PRKNO60260 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PRKNO60260 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRKNO60260 AP001273.1-201ENST00000624493 3152 ntBASIC3.9□□□□□ -1.78
PRKNO60260 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRKNO60260 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.78
PRKNO60260 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PRKNO60260 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PRKNO60260 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 RNU1-94P-201ENST00000362627 173 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNU5D-1-201ENST00000363299 116 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNA5SP479-201ENST00000364858 117 ntBASIC3.9□□□□□ -1.79
PRKNO60260 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRKNO60260 RPL23AP47-201ENST00000408017 460 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNU2-65P-201ENST00000410162 185 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNA5SP317-201ENST00000410176 116 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNA5SP311-201ENST00000411290 116 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 CEACAMP8-201ENST00000413902 580 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 UBTFL3-201ENST00000418934 1024 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC098592.1-201ENST00000419352 333 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 GSTA7P-201ENST00000438425 448 ntBASIC3.9□□□□□ -1.79
PRKNO60260 UBE2D3P4-201ENST00000441973 436 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RAB11AP1-201ENST00000442978 646 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 RPL12P26-201ENST00000452430 487 ntBASIC3.9□□□□□ -1.79
PRKNO60260 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 UBTFL6-201ENST00000477929 1024 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RPS3AP43-201ENST00000479743 781 ntBASIC3.9□□□□□ -1.79
PRKNO60260 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRKNO60260 AC021146.3-201ENST00000511911 260 ntBASIC3.9□□□□□ -1.79
PRKNO60260 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 RNA5SP315-201ENST00000516340 116 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNU6-759P-201ENST00000516740 103 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNA5SP312-201ENST00000517068 116 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RNU6-232P-201ENST00000517144 64 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AF186190.1-201ENST00000517470 480 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AP001207.1-201ENST00000524051 481 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 PHBP17-201ENST00000528576 541 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC105233.3-201ENST00000531125 744 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC135279.1-201ENST00000543493 504 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.9□□□□□ -1.79
PRKNO60260 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.9□□□□□ -1.79
PRKNO60260 AC002400.1-201ENST00000569310 726 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC110760.3-201ENST00000598794 467 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AL390838.2-201ENST00000602394 274 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 AC009220.3-201ENST00000604318 586 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC245008.1-201ENST00000608123 476 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC084782.3-201ENST00000612282 578 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AL392048.1-201ENST00000613946 534 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AP003072.4-201ENST00000624580 310 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.9□□□□□ -1.79
PRKNO60260 AC068724.3-201ENST00000625906 87 ntBASIC3.9□□□□□ -1.79
PRKNO60260 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 AL133243.3-201ENST00000617415 3004 ntBASIC3.9□□□□□ -1.79
PRKNO60260 AC005539.1-201ENST00000443768 1479 ntBASIC3.9□□□□□ -1.79
PRKNO60260 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.9□□□□□ -1.79
PRKNO60260 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRKNO60260 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.9□□□□□ -1.79
PRKNO60260 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PRKNO60260 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
PRKNO60260 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 AC092162.3-201ENST00000624511 1624 ntBASIC3.89□□□□□ -1.79
PRKNO60260 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 AC011155.1-201ENST00000316512 456 ntBASIC3.89□□□□□ -1.79
PRKNO60260 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PRKNO60260 RNU6-1066P-201ENST00000363573 105 ntBASIC3.89□□□□□ -1.79
PRKNO60260 RNA5SP28-201ENST00000363841 119 ntBASIC3.89□□□□□ -1.79
PRKNO60260 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 RNU6-146P-201ENST00000384602 108 ntBASIC3.89□□□□□ -1.79
PRKNO60260 SNORD116-23-201ENST00000384645 92 ntBASIC3.89□□□□□ -1.79
PRKNO60260 RNU6-1151P-201ENST00000384684 107 ntBASIC3.89□□□□□ -1.79
PRKNO60260 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.89□□□□□ -1.79
PRKNO60260 RN7SKP33-201ENST00000410942 340 ntBASIC3.89□□□□□ -1.79
PRKNO60260 OR8G2P-201ENST00000412796 908 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC009237.10-201ENST00000414112 510 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms