Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR4496-201ENST00000635896 61 ntBASIC4.74□□□□□ -1.65
PHGDHO43175 Z95327.2-201ENST00000414579 1873 ntBASIC4.74□□□□□ -1.65
PHGDHO43175 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PHGDHO43175 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHGDHO43175 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHGDHO43175 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PHGDHO43175 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.74□□□□□ -1.65
PHGDHO43175 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PHGDHO43175 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PHGDHO43175 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PHGDHO43175 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHGDHO43175 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PHGDHO43175 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PHGDHO43175 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PHGDHO43175 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHGDHO43175 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
PHGDHO43175 RNVU1-3-201ENST00000364313 161 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.73□□□□□ -1.65
PHGDHO43175 SNORD96B-201ENST00000386148 79 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 GLULP6-201ENST00000399502 913 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 MTCYBP36-201ENST00000404146 440 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 FABP7P1-201ENST00000424004 391 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.73□□□□□ -1.65
PHGDHO43175 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 HSPE1P28-201ENST00000443139 211 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.73□□□□□ -1.65
PHGDHO43175 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PHGDHO43175 RPL7L1P1-201ENST00000448259 785 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC005297.2-201ENST00000450430 606 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.73□□□□□ -1.65
PHGDHO43175 AL445669.2-201ENST00000454425 421 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC087312.1-201ENST00000471411 480 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 RN7SL214P-201ENST00000487317 265 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.73□□□□□ -1.65
PHGDHO43175 RPS4XP14-201ENST00000493072 781 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.73□□□□□ -1.65
PHGDHO43175 AC109458.1-201ENST00000508858 316 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC024589.1-201ENST00000512207 263 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC116347.2-201ENST00000514912 523 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.73□□□□□ -1.65
PHGDHO43175 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.73□□□□□ -1.65
PHGDHO43175 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.73□□□□□ -1.65
PHGDHO43175 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.73□□□□□ -1.65
PHGDHO43175 AL161713.1-201ENST00000555538 145 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC079075.1-201ENST00000559543 878 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.73□□□□□ -1.65
PHGDHO43175 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.73□□□□□ -1.65
PHGDHO43175 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.73□□□□□ -1.65
PHGDHO43175 AC012213.3-201ENST00000577199 777 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.73□□□□□ -1.65
PHGDHO43175 OR4G1P-201ENST00000588632 938 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC012065.4-201ENST00000602445 679 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC020910.3-201ENST00000603701 874 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC112187.2-201ENST00000604345 283 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AL451086.1-201ENST00000605596 223 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC090186.1-201ENST00000605991 572 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AL139286.2-201ENST00000606838 396 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AL353600.1-201ENST00000608148 251 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AP000254.1-201ENST00000609934 520 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC007497.1-201ENST00000610421 561 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 EIF3FP1-201ENST00000613970 806 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AC090116.1-201ENST00000615679 446 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.73□□□□□ -1.65
PHGDHO43175 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PHGDHO43175 AC092435.4-201ENST00000623012 4159 ntBASIC4.73□□□□□ -1.65
PHGDHO43175 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHGDHO43175 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHGDHO43175 AC092104.1-201ENST00000497346 1441 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 HSPA8P18-201ENST00000439846 1928 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AL136164.3-201ENST00000624429 3978 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHGDHO43175 RN7SKP95-201ENST00000362860 303 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 U8.14-201ENST00000390843 143 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 U3.30-201ENST00000391308 210 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.72□□□□□ -1.65
PHGDHO43175 AL592293.2-201ENST00000422292 996 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.72□□□□□ -1.65
PHGDHO43175 AL645608.4-201ENST00000423619 154 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 CENPIP1-201ENST00000425713 902 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.72□□□□□ -1.65
PHGDHO43175 Z80107.2-201ENST00000445127 392 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PHGDHO43175 AC002381.1-201ENST00000447049 280 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC010733.1-201ENST00000451515 401 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 DNAJC19P1-201ENST00000455312 319 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.72□□□□□ -1.65
PHGDHO43175 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.72□□□□□ -1.65
PHGDHO43175 snoU13.20-201ENST00000459180 104 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC022034.3-201ENST00000471393 478 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.72□□□□□ -1.65
PHGDHO43175 AC022447.1-201ENST00000515358 464 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PHGDHO43175 RNU2-30P-201ENST00000516209 141 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 RNA5SP34-201ENST00000516887 130 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.72□□□□□ -1.65
PHGDHO43175 COX6CP8-201ENST00000522620 226 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 OR5BC1P-201ENST00000529327 739 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.72□□□□□ -1.65
PHGDHO43175 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.72□□□□□ -1.65
PHGDHO43175 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms