Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 AC114755.5-201ENST00000447760 831 ntBASIC3.55□□□□□ -1.84
LSM1O15116 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
LSM1O15116 AC022034.3-201ENST00000471393 478 ntBASIC3.55□□□□□ -1.84
LSM1O15116 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM1O15116 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
LSM1O15116 AC008885.2-201ENST00000509506 930 ntBASIC3.55□□□□□ -1.84
LSM1O15116 RN7SKP96-201ENST00000516948 297 ntBASIC3.55□□□□□ -1.84
LSM1O15116 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM1O15116 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.55□□□□□ -1.84
LSM1O15116 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 HMGN2P28-201ENST00000606102 262 ntBASIC3.55□□□□□ -1.84
LSM1O15116 STMN1P1-201ENST00000617809 440 ntBASIC3.55□□□□□ -1.84
LSM1O15116 FP236240.3-201ENST00000623061 327 ntBASIC3.55□□□□□ -1.84
LSM1O15116 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM1O15116 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LSM1O15116 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM1O15116 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
LSM1O15116 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM1O15116 RNU6-600P-201ENST00000362524 99 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AL355379.1-201ENST00000405542 640 ntBASIC3.54□□□□□ -1.84
LSM1O15116 HMGB3P18-201ENST00000406327 590 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AP000567.1-201ENST00000406413 156 ntBASIC3.54□□□□□ -1.84
LSM1O15116 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 AC244098.2-201ENST00000422068 99 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 HMGB1P45-201ENST00000435986 653 ntBASIC3.54□□□□□ -1.84
LSM1O15116 FABP5P3-201ENST00000437960 408 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC006994.1-201ENST00000438212 839 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AL662791.1-201ENST00000441992 928 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RPL21P89-201ENST00000444021 467 ntBASIC3.54□□□□□ -1.84
LSM1O15116 H2AFZP6-201ENST00000444403 394 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RPS15AP29-201ENST00000445539 400 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RPL7P59-201ENST00000447700 943 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RPL23AP23-201ENST00000452590 471 ntBASIC3.54□□□□□ -1.84
LSM1O15116 MTND2P6-201ENST00000455337 1030 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 RPL31P13-201ENST00000484151 370 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RPS3AP50-201ENST00000487064 803 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RPL23AP73-201ENST00000492507 471 ntBASIC3.54□□□□□ -1.84
LSM1O15116 RN7SL323P-201ENST00000494712 295 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM1O15116 SNORA48.9-201ENST00000516419 162 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC103833.1-201ENST00000517442 172 ntBASIC3.54□□□□□ -1.84
LSM1O15116 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 AC083923.1-201ENST00000523708 376 ntBASIC3.54□□□□□ -1.84
LSM1O15116 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.54□□□□□ -1.84
LSM1O15116 AL121766.1-201ENST00000547436 487 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
LSM1O15116 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 AC090312.2-201ENST00000582687 378 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM1O15116 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 AL606490.9-201ENST00000603331 271 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 AC090425.2-201ENST00000608818 501 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AL136295.6-201ENST00000610486 658 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AL162233.1-201ENST00000620014 944 ntBASIC3.54□□□□□ -1.84
LSM1O15116 MIR6758-201ENST00000620653 63 ntBASIC3.54□□□□□ -1.84
LSM1O15116 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 AL732372.2-225ENST00000642124 456 ntBASIC3.54□□□□□ -1.84
LSM1O15116 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM1O15116 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM1O15116 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM1O15116 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LSM1O15116 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM1O15116 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
LSM1O15116 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LSM1O15116 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
LSM1O15116 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
LSM1O15116 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM1O15116 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM1O15116 AC012498.1-201ENST00000424037 437 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
LSM1O15116 YY1P1-201ENST00000427625 668 ntBASIC3.53□□□□□ -1.84
LSM1O15116 OR51AB1P-201ENST00000429046 620 ntBASIC3.53□□□□□ -1.84
LSM1O15116 PSMA2P3-201ENST00000429685 675 ntBASIC3.53□□□□□ -1.84
LSM1O15116 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 OR4C10P-201ENST00000434991 931 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms