Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC005498.1-201ENST00000592125 465 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AP001836.1-201ENST00000604675 523 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AC103710.4-201ENST00000609301 899 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AC009233.1-201ENST00000616477 371 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 MIR3662-201ENST00000637030 95 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AC112487.2-201ENST00000637950 304 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 ADAM5-202ENST00000399789 1942 ntBASIC4.24□□□□□ -1.73
CGB1A6NKQ9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CGB1A6NKQ9 AL034549.2-201ENST00000618285 3373 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 GDI2P1-201ENST00000429312 1336 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 RNU1-19P-201ENST00000363306 165 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 U3.7-201ENST00000363668 216 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.162-201ENST00000363683 102 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 RNA5SP510-201ENST00000364697 99 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.460-201ENST00000384255 102 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MIR1302-11-201ENST00000408051 138 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MIR1302-9-201ENST00000408365 138 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MIR1302-10-201ENST00000408734 138 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 Z93019.1-201ENST00000416450 973 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AL358934.1-201ENST00000432346 324 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC012075.1-201ENST00000436549 580 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 HMGN1P36-201ENST00000446623 298 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 GAPDHP17-201ENST00000449858 1001 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 GAPDHP14-201ENST00000450472 937 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AL590365.1-201ENST00000450788 243 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MTCO3P20-201ENST00000454926 688 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC108161.1-201ENST00000461060 402 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC023598.1-201ENST00000472521 361 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 EIF3LP3-201ENST00000495197 822 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 RPS24P16-201ENST00000497294 392 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.704-201ENST00000516851 102 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AL512360.1-201ENST00000555346 234 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC025678.1-201ENST00000567861 338 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MIR3682-201ENST00000581338 84 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC067852.4-201ENST00000590314 478 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC011626.1-201ENST00000604710 562 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC055876.5-201ENST00000605667 259 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 MIR1302-2-201ENST00000607096 138 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AP000843.1-201ENST00000624880 701 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AC006065.6-201ENST00000625201 545 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.23□□□□□ -1.73
CGB1A6NKQ9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms