Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AL034418.1-201ENST00000448675 860 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPS17P11-201ENST00000474297 293 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC078785.3-201ENST00000476607 425 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 RN7SL459P-201ENST00000481078 302 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 SNORA31.20-201ENST00000517111 133 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AP000790.1-201ENST00000528891 737 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 OR4R2P-201ENST00000530815 597 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC022968.1-201ENST00000567372 442 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AGGF1P6-201ENST00000569213 976 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 GAS5-AS1-201ENST00000602767 694 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL355812.1-201ENST00000603215 216 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 MTATP6P2-201ENST00000603319 678 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC103881.1-201ENST00000603476 538 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL158211.2-201ENST00000607282 395 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC114781.5-201ENST00000615297 108 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC006963.1-201ENST00000624003 1052 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC090506.2-201ENST00000624521 419 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 MIR3653-201ENST00000625572 110 ntBASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF103-CHMP3A0A140T963 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 MTND4P10-201ENST00000446199 1363 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPS4XP5-202ENST00000449995 1334 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC130650.2-201ENST00000618736 2403 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 RNU11-4P-201ENST00000391149 133 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 HSPE1P12-201ENST00000412576 301 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 FNDC3CP-201ENST00000420795 1155 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL592293.2-201ENST00000422292 996 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 OR5BE1P-201ENST00000425977 939 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 NPM1P13-201ENST00000452663 865 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 HMGN2P16-201ENST00000456802 261 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPL21P104-201ENST00000464143 478 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPS27AP13-201ENST00000498403 237 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC091860.1-201ENST00000505723 432 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 RNU5A-7P-201ENST00000515979 116 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 MED28P5-201ENST00000528254 438 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC009643.1-201ENST00000532030 391 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC012182.1-201ENST00000570133 895 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC084824.5-201ENST00000612009 413 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC073968.1-201ENST00000618594 637 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 OR5BE1P-202ENST00000641168 1176 ntBASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF103-CHMP3A0A140T963 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC005261.4-201ENST00000600047 1385 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 RNA5SP258-201ENST00000362750 119 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 RNU6-582P-201ENST00000362989 107 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPL37P18-201ENST00000411602 243 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC019070.1-201ENST00000415008 1024 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 AC093698.1-201ENST00000423843 571 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 AL590103.1-201ENST00000434488 307 ntBASIC3.78□□□□□ -1.8
RNF103-CHMP3A0A140T963 RPS7P2-201ENST00000435134 607 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms