Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 EIF5A2P1-201ENST00000564027 460 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC233309.1-201ENST00000619522 751 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC006065.5-201ENST00000623427 349 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AL359715.5-201ENST00000623431 443 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 FAM91A3P-201ENST00000456826 2544 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-444P-201ENST00000383988 108 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 RPL17P36-201ENST00000420302 549 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 PTP4A1P7-201ENST00000423476 514 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC083863.1-201ENST00000438811 231 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 ARF4P4-201ENST00000439608 520 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 HMGB1P37-201ENST00000439613 609 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 MTCO1P14-201ENST00000441695 1559 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 RPS15AP1-201ENST00000457423 391 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL133477.1-201ENST00000457472 514 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC087879.1-201ENST00000474343 374 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC008427.1-201ENST00000503102 655 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC069306.1-201ENST00000507006 843 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC118282.2-201ENST00000508739 374 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC010374.2-201ENST00000512933 535 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC016065.2-201ENST00000514530 444 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 YPEL5P3-201ENST00000547227 352 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL139022.2-201ENST00000606934 443 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AF129408.1-201ENST00000608767 431 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AL591424.2-201ENST00000617023 128 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 BX649567.1-201ENST00000642071 1134 ntBASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4BQ9Y4P1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 XIAPP3-201ENST00000312918 795 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-236P-201ENST00000363886 106 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-1257P-201ENST00000384625 110 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC069218.2-201ENST00000411665 344 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC093698.1-201ENST00000423843 571 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 PSMA2P3-201ENST00000429685 675 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC010881.1-201ENST00000433830 235 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 B3GNT2P1-201ENST00000434960 952 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 PPIAP17-201ENST00000438507 471 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RPL23AP33-201ENST00000442301 452 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 NAP1L1P3-201ENST00000462291 880 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RPS4XP15-201ENST00000489210 795 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC110792.1-201ENST00000491826 472 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RPL7P24-201ENST00000493052 752 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 RNF138P1-201ENST00000502765 546 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 FTH1P21-201ENST00000512179 511 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms