Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC106730.3-201ENST00000624568 641 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 MTND4P31-201ENST00000425607 1343 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 RNA5SP479-201ENST00000364858 117 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 SKINT1L-201ENST00000401057 817 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AL590290.1-201ENST00000405336 380 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AIMP1P1-201ENST00000418670 937 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 ARL5AP2-201ENST00000444698 533 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 TPMTP4-201ENST00000450749 678 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC099563.1-201ENST00000456086 418 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC091959.2-201ENST00000477363 321 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC104687.1-201ENST00000485829 412 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 Vault.1-201ENST00000516474 102 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 RN7SKP289-201ENST00000517244 295 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC093331.1-201ENST00000521474 169 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC006518.1-201ENST00000541449 943 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 POLR2KP1-201ENST00000553226 168 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 MTND4LP24-201ENST00000572277 291 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 NF1P5-201ENST00000588287 448 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC005776.1-201ENST00000603164 290 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC011816.2-201ENST00000607089 556 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AL355816.1-201ENST00000607951 118 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 MIR8084-201ENST00000614105 89 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 AC008432.1-201ENST00000615912 1320 ntBASIC3.34□□□□□ -1.87
TRAPPC4Q9Y296 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.88
TRAPPC4Q9Y296 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRAPPC4Q9Y296 RNU1-64P-201ENST00000365443 163 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 SNORA40.4-201ENST00000390971 128 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 ATP5F1P6-201ENST00000402768 767 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AL356967.1-201ENST00000406305 431 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 HMGB3P31-201ENST00000413333 595 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 RPL17P36-201ENST00000420302 549 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 GTF2IP23-201ENST00000423746 351 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 USP9YP7-201ENST00000436723 430 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 USP9YP32-201ENST00000452432 430 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC002456.2-201ENST00000509356 380 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC026402.1-201ENST00000513642 170 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 MTND2P7-201ENST00000521337 640 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AC103710.3-201ENST00000608157 948 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 MIR6798-201ENST00000612887 67 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 U6.48-201ENST00000618523 106 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AP000553.6-201ENST00000641242 118 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 MFSD8-213ENST00000641134 1327 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 MTCO1P4-201ENST00000520516 1409 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
TRAPPC4Q9Y296 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC073073.2-201ENST00000609827 2578 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms