Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 RNU6-152P-201ENST00000384037 107 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 MIR184-201ENST00000384962 84 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL391417.1-201ENST00000404100 426 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 SDCBPP2-201ENST00000424643 885 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 HMGN2P31-201ENST00000432430 273 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 RPS29P31-201ENST00000446147 164 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL136097.1-201ENST00000456945 913 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 PLGLA-201ENST00000465668 449 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 NPM1P17-201ENST00000479221 602 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AP001086.1-201ENST00000494882 321 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC111193.1-201ENST00000504097 155 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC090071.1-201ENST00000507713 644 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 RN7SKP18-201ENST00000516005 275 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 MIR5195-201ENST00000583555 115 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC020914.6-201ENST00000594327 272 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL392112.1-201ENST00000605115 829 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AL365503.1-201ENST00000605247 905 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 RNVU1-4-201ENST00000612985 164 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC018816.2-201ENST00000621460 353 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 RIOK3P1-201ENST00000418778 1528 ntBASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
CTNNA3Q9UI47 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 Y_RNA.111-201ENST00000363248 100 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 RNA5SP42-201ENST00000364278 115 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 RPS29P4-201ENST00000414733 161 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 HMGN2P21-201ENST00000447764 270 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 RPL23AP14-201ENST00000468281 468 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC074250.1-201ENST00000511117 192 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 MIR3186-201ENST00000577404 85 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 MIMT1-201ENST00000597105 1050 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC112503.1-201ENST00000608436 391 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC110792.4-201ENST00000609843 298 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AP003355.3-201ENST00000623465 114 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 AC119674.1-207ENST00000641355 633 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 GTF2H2B-203ENST00000508065 1432 ntBASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA3Q9UI47 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 SNORD9-201ENST00000362566 104 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 RNU6-283P-201ENST00000364788 107 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 NDUFB4P4-201ENST00000404822 243 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 U3.39-201ENST00000408569 239 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC068533.1-201ENST00000418542 415 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms