Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 ZNF833P-201ENST00000424938 1494 ntBASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 OR11H5P-202ENST00000641612 1325 ntBASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.57□□□□□ -1.68
NPC1L1Q9UHC9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AL359715.4-201ENST00000606629 1436 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU1-70P-201ENST00000362618 164 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-984P-201ENST00000363236 109 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-304P-201ENST00000364855 107 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU4-31P-201ENST00000384211 141 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-532P-201ENST00000384318 107 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 SNORA48.2-201ENST00000390926 124 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-55P-201ENST00000411092 107 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNA5SP31-201ENST00000411144 127 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-954P-201ENST00000411355 107 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC127526.1-201ENST00000417526 366 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC005326.1-201ENST00000429197 123 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC092013.1-201ENST00000438795 332 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RPL6P9-201ENST00000466502 859 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RPL32P34-201ENST00000486380 400 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 TGIF1P1-201ENST00000558095 802 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC242628.1-201ENST00000606810 391 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
NPC1L1Q9UHC9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 SNORD115-48-201ENST00000364764 76 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AP002088.1-201ENST00000382740 395 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC012065.2-201ENST00000421295 375 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC005300.1-201ENST00000428401 373 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 BTBD7P2-201ENST00000441962 620 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC098799.1-201ENST00000504752 800 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 RNU1-103P-201ENST00000516502 125 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 RNU6-347P-201ENST00000516658 105 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC107934.2-201ENST00000518653 310 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AL731537.2-201ENST00000561565 951 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 MIR4425-201ENST00000580572 84 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 MIR4276-201ENST00000584832 70 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AL049844.2-201ENST00000604280 628 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 CR589904.2-201ENST00000612533 440 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 MIR8058-201ENST00000615737 89 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC008725.1-201ENST00000605123 2263 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC010329.2-201ENST00000595195 2737 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AC114546.3-201ENST00000623582 1734 ntBASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NPC1L1Q9UHC9 RNU1-87P-201ENST00000363727 170 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 MIR320B1-201ENST00000390209 79 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 Z86062.1-201ENST00000406773 777 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 RN7SKP222-201ENST00000410651 315 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 TRGV6-201ENST00000417928 299 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 ZFAND6P1-201ENST00000434138 605 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 HMGB1P21-201ENST00000502313 581 ntBASIC4.54□□□□□ -1.68
NPC1L1Q9UHC9 AC021146.1-201ENST00000511202 716 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms