Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LIMD1Q9UGP4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
LIMD1Q9UGP4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.71□□□□□ -1.34
LIMD1Q9UGP4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC241584.2-201ENST00000637142 2090 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC068733.2-201ENST00000605434 1418 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNA5SP65-201ENST00000363166 119 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNU6-1284P-201ENST00000363701 100 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNU6-188P-201ENST00000364207 107 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNU4-2-201ENST00000365668 141 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNA5SP178-201ENST00000410380 128 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RN7SKP281-201ENST00000410472 352 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RPL30P2-201ENST00000414021 291 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 MTND6P12-201ENST00000428247 522 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RPS15AP27-201ENST00000449183 343 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RPL21P93-201ENST00000480465 489 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNA5SP271-201ENST00000516700 88 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNU6-1213P-201ENST00000517075 94 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RNA5SP340-201ENST00000517132 107 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 RN7SL475P-201ENST00000583379 298 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC073539.2-201ENST00000597113 165 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 NUTF2P8-201ENST00000604593 363 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC073046.2-201ENST00000604756 527 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 U2.17-201ENST00000611454 95 ntBASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMD1Q9UGP4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC010168.2-201ENST00000562691 5428 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC116667.1-201ENST00000604855 2072 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AL139384.2-201ENST00000613809 3590 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 RNVU1-3-201ENST00000364313 161 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 DEFB109C-201ENST00000382575 264 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 DEFB109B-201ENST00000382656 264 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 RNY1P14-201ENST00000384426 108 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 SNORA75.6-201ENST00000391318 127 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 RPL36P18-201ENST00000419316 318 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 RPL21P112-201ENST00000434403 463 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AL161636.2-201ENST00000445179 927 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 PPIAP7-201ENST00000454070 489 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 RN7SL284P-201ENST00000498823 275 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 RN7SKP238-201ENST00000516483 249 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AP000620.1-201ENST00000527147 504 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 GNAI2P1-201ENST00000541815 315 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 TPRX1P1-201ENST00000557620 319 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 NPIPB1P-202ENST00000588786 828 ntBASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.69□□□□□ -1.34
LIMD1Q9UGP4 AL670379.6-201ENST00000603753 252 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms