Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 RAC1P3-201ENST00000416129 580 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 GLRXP1-201ENST00000423261 334 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 ISCA1P2-201ENST00000438679 421 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 HIGD1AP13-201ENST00000509878 289 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 RNA5SP367-201ENST00000516557 118 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 AC015871.2-201ENST00000603605 948 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 AC138393.1-206ENST00000540997 1886 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 MTCO1P8-201ENST00000416914 1523 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 MIR22-201ENST00000362190 85 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 RANP4-201ENST00000413361 655 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 COX6CP8-201ENST00000522620 226 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 AC024153.1-201ENST00000603103 365 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 AL096803.3-201ENST00000609032 532 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 AC073476.4-201ENST00000628409 72 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 THAP12P8-201ENST00000447914 2115 ntBASIC4.11□□□□□ -1.75
PHRF1Q9P1Y6 RN7SKP247-201ENST00000411094 308 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AL592148.1-201ENST00000413568 445 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC019097.1-201ENST00000424783 735 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AL136097.1-201ENST00000456945 913 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC126389.1-201ENST00000477436 290 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 MIR2114-201ENST00000516645 80 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC091544.4-201ENST00000555268 342 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 GABRG2-229ENST00000641017 3628 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 RPL6P21-201ENST00000418672 846 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 HMGN2P7-201ENST00000456186 273 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC103783.1-201ENST00000520506 373 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC090281.1-201ENST00000523019 276 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 AC068722.2-201ENST00000618734 544 ntBASIC4.1□□□□□ -1.75
PHRF1Q9P1Y6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHRF1Q9P1Y6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHRF1Q9P1Y6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
PHRF1Q9P1Y6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHRF1Q9P1Y6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 OR56A5-201ENST00000340110 738 ntBASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 AL645937.1-202ENST00000421799 937 ntBASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 AC139713.2-210ENST00000641741 992 ntBASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.09□□□□□ -1.76
PHRF1Q9P1Y6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC116096.1-201ENST00000566804 2314 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 OR1S2-201ENST00000302592 978 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 Z93242.1-201ENST00000427102 353 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AL035407.1-201ENST00000429211 571 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 PRDX3P4-201ENST00000470828 747 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 RNU6-237P-201ENST00000515985 71 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 MIR2276-201ENST00000516886 89 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC018690.1-201ENST00000608144 626 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC004832.5-201ENST00000608677 401 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC019080.5-201ENST00000624891 757 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 AC104446.1-201ENST00000613728 1321 ntBASIC4.08□□□□□ -1.76
PHRF1Q9P1Y6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms