Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC018692.3-201ENST00000623929 123 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 MTND5P24-201ENST00000438892 1767 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC017002.4-201ENST00000604721 1525 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 MIR208A-201ENST00000362287 71 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 RNU6-673P-201ENST00000365084 104 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 OR52E6-202ENST00000379946 954 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 SNORA7.4-201ENST00000384249 137 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 RPL31P52-201ENST00000407532 367 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 MIR1183-201ENST00000408856 89 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC048351.1-201ENST00000420064 602 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AL353678.1-201ENST00000422735 741 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 GTF2IP23-201ENST00000423746 351 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC108734.1-201ENST00000439549 399 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 PRDX3P4-201ENST00000470828 747 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC087385.1-201ENST00000475062 312 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC005912.1-201ENST00000495392 255 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC007423.1-201ENST00000605009 627 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC110741.2-201ENST00000605278 268 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 YPEL5P2-201ENST00000605553 359 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AL365400.2-201ENST00000605604 902 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC105227.2-201ENST00000615075 605 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC022960.2-201ENST00000616300 666 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 AC007342.8-201ENST00000623278 678 ntBASIC3.36□□□□□ -1.87
CISHQ9NSE2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.36□□□□□ -1.87
CISHQ9NSE2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CISHQ9NSE2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CISHQ9NSE2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 MT-TP-201ENST00000387461 68 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 RPL32P35-201ENST00000415214 394 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 ST13P14-201ENST00000474095 734 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC087888.1-201ENST00000550884 1254 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 MIR5004-201ENST00000579078 107 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC096577.2-201ENST00000611455 153 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC245389.2-201ENST00000616023 576 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC242843.1-201ENST00000618702 573 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 AC026422.1-201ENST00000623961 452 ntBASIC3.35□□□□□ -1.87
CISHQ9NSE2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CISHQ9NSE2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CISHQ9NSE2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
CISHQ9NSE2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CISHQ9NSE2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CISHQ9NSE2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.34□□□□□ -1.87
CISHQ9NSE2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CISHQ9NSE2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CISHQ9NSE2 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 U3.11-201ENST00000364476 212 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 U3.15-201ENST00000365398 212 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CISHQ9NSE2 AL034374.1-201ENST00000406329 351 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 USP9YP7-201ENST00000436723 430 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 AL353093.1-201ENST00000441292 436 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
CISHQ9NSE2 USP9YP32-201ENST00000452432 430 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 CALM1P2-201ENST00000452941 448 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 AC010683.1-201ENST00000473673 378 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CISHQ9NSE2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.34□□□□□ -1.87
CISHQ9NSE2 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 AL161713.1-201ENST00000555538 145 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.34□□□□□ -1.87
CISHQ9NSE2 CCDC58P3-201ENST00000590792 430 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.34□□□□□ -1.87
CISHQ9NSE2 AL049844.2-201ENST00000604280 628 ntBASIC3.34□□□□□ -1.87
CISHQ9NSE2 ELL2P4-201ENST00000446870 1376 ntBASIC3.34□□□□□ -1.88
CISHQ9NSE2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CISHQ9NSE2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
CISHQ9NSE2 SRP72P2-201ENST00000344851 1979 ntBASIC3.34□□□□□ -1.88
CISHQ9NSE2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms