Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.73□□□□□ -1.65
SCAPERQ9BY12 PCBP2P3-201ENST00000509726 843 ntBASIC4.73□□□□□ -1.65
SCAPERQ9BY12 AC021146.1-201ENST00000511202 716 ntBASIC4.73□□□□□ -1.65
SCAPERQ9BY12 AC093755.1-201ENST00000512950 1023 ntBASIC4.73□□□□□ -1.65
SCAPERQ9BY12 AC018797.3-201ENST00000513388 1241 ntBASIC4.73□□□□□ -1.65
SCAPERQ9BY12 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.73□□□□□ -1.65
SCAPERQ9BY12 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.73□□□□□ -1.65
SCAPERQ9BY12 AL359535.1-201ENST00000612100 1087 ntBASIC4.73□□□□□ -1.65
SCAPERQ9BY12 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.73□□□□□ -1.65
SCAPERQ9BY12 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 SNORD67-201ENST00000390833 111 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 RNA5SP184-201ENST00000411071 108 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 SETP10-201ENST00000424368 814 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AL109933.2-201ENST00000452651 260 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 uc_338.32-201ENST00000615087 172 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AL445529.1-201ENST00000398713 389 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 AL096803.3-201ENST00000609032 532 ntBASIC4.72□□□□□ -1.65
SCAPERQ9BY12 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SCAPERQ9BY12 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 OR1S2-201ENST00000302592 978 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 HSPD1P16-201ENST00000402302 394 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AL356968.1-201ENST00000416622 474 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 Z93242.1-201ENST00000427102 353 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AL139174.1-201ENST00000531489 886 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 HMGB1P6-201ENST00000569046 646 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AC124856.1-201ENST00000600819 896 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 RPL23AP92-201ENST00000603609 255 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AF117829.1-206ENST00000621883 3802 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 IGHVIII-44-202ENST00000636235 289 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 AC139713.2-210ENST00000641741 992 ntBASIC4.71□□□□□ -1.66
SCAPERQ9BY12 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SCAPERQ9BY12 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AL136116.1-201ENST00000403591 381 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 MIR1261-201ENST00000408659 82 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AC112492.1-201ENST00000449607 712 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 RPS4XP13-201ENST00000483219 789 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 HIGD1AP13-201ENST00000509878 289 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 RMST_8.1-201ENST00000610287 165 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 AC016590.3-201ENST00000611171 753 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 CYCSP41-201ENST00000616920 296 ntBASIC4.7□□□□□ -1.66
SCAPERQ9BY12 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCAPERQ9BY12 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SCAPERQ9BY12 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCAPERQ9BY12 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SCAPERQ9BY12 RPS4XP8-201ENST00000402039 771 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 AL035407.1-201ENST00000429211 571 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 ETF1P3-201ENST00000430422 1160 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 MTND6P18-201ENST00000439477 513 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 AC117440.1-201ENST00000474107 571 ntBASIC4.69□□□□□ -1.66
SCAPERQ9BY12 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.69□□□□□ -1.66
SCAPERQ9BY12 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms