Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMOQ99835 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.85□□□□□ -1.63
SMOQ99835 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SMOQ99835 AC108467.2-201ENST00000617640 1597 ntBASIC4.85□□□□□ -1.63
SMOQ99835 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.85□□□□□ -1.63
SMOQ99835 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SMOQ99835 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SMOQ99835 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMOQ99835 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.84□□□□□ -1.63
SMOQ99835 THAP12P5-201ENST00000405864 2275 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC009313.2-201ENST00000417893 1941 ntBASIC4.84□□□□□ -1.63
SMOQ99835 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SMOQ99835 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMOQ99835 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMOQ99835 RNU1-32P-201ENST00000363937 159 ntBASIC4.84□□□□□ -1.63
SMOQ99835 RNU6-723P-201ENST00000383973 107 ntBASIC4.84□□□□□ -1.63
SMOQ99835 Y_RNA.516-201ENST00000384541 124 ntBASIC4.84□□□□□ -1.63
SMOQ99835 MIR129-1-201ENST00000384972 72 ntBASIC4.84□□□□□ -1.63
SMOQ99835 MIR506-201ENST00000384998 124 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.84□□□□□ -1.63
SMOQ99835 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMOQ99835 PRELID3BP11-201ENST00000414230 479 ntBASIC4.84□□□□□ -1.63
SMOQ99835 RAD23BP2-201ENST00000416003 1207 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.84□□□□□ -1.63
SMOQ99835 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.84□□□□□ -1.63
SMOQ99835 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SMOQ99835 AL953862.1-201ENST00000423016 168 ntBASIC4.84□□□□□ -1.63
SMOQ99835 NIPA2P1-201ENST00000426223 976 ntBASIC4.84□□□□□ -1.63
SMOQ99835 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.84□□□□□ -1.63
SMOQ99835 RPL37P1-201ENST00000432310 284 ntBASIC4.84□□□□□ -1.63
SMOQ99835 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.84□□□□□ -1.63
SMOQ99835 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.84□□□□□ -1.63
SMOQ99835 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.84□□□□□ -1.63
SMOQ99835 AC023424.1-201ENST00000496058 459 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.84□□□□□ -1.63
SMOQ99835 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.84□□□□□ -1.63
SMOQ99835 ARL2BPP4-201ENST00000506854 471 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.84□□□□□ -1.63
SMOQ99835 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.84□□□□□ -1.63
SMOQ99835 AP000790.1-201ENST00000528891 737 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC090502.2-201ENST00000549267 280 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.84□□□□□ -1.63
SMOQ99835 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.84□□□□□ -1.63
SMOQ99835 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.84□□□□□ -1.63
SMOQ99835 AC084783.1-201ENST00000565846 910 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.84□□□□□ -1.63
SMOQ99835 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.84□□□□□ -1.63
SMOQ99835 AP005119.2-201ENST00000579735 1105 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC069061.3-201ENST00000582254 823 ntBASIC4.84□□□□□ -1.63
SMOQ99835 MIR4715-201ENST00000584117 79 ntBASIC4.84□□□□□ -1.63
SMOQ99835 RPL12P25-202ENST00000598100 674 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC093765.1-201ENST00000603758 881 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC023813.4-201ENST00000607580 580 ntBASIC4.84□□□□□ -1.63
SMOQ99835 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.84□□□□□ -1.63
SMOQ99835 AC108747.1-201ENST00000609508 535 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC008498.1-201ENST00000613012 531 ntBASIC4.84□□□□□ -1.63
SMOQ99835 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AL357080.1-201ENST00000617394 239 ntBASIC4.84□□□□□ -1.63
SMOQ99835 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.84□□□□□ -1.63
SMOQ99835 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.84□□□□□ -1.63
SMOQ99835 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SMOQ99835 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.84□□□□□ -1.63
SMOQ99835 SALL4P2-201ENST00000423288 2910 ntBASIC4.84□□□□□ -1.63
SMOQ99835 AC125257.1-201ENST00000560400 2930 ntBASIC4.84□□□□□ -1.63
SMOQ99835 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SMOQ99835 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SMOQ99835 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SMOQ99835 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
SMOQ99835 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SMOQ99835 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.84□□□□□ -1.64
SMOQ99835 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SMOQ99835 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.84□□□□□ -1.64
SMOQ99835 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.84□□□□□ -1.64
SMOQ99835 AC025125.1-201ENST00000624743 1922 ntBASIC4.84□□□□□ -1.64
SMOQ99835 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SMOQ99835 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.83□□□□□ -1.64
SMOQ99835 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.83□□□□□ -1.64
SMOQ99835 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
SMOQ99835 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SMOQ99835 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMOQ99835 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMOQ99835 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.83□□□□□ -1.64
SMOQ99835 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SMOQ99835 MTND4P16-201ENST00000466108 1367 ntBASIC4.83□□□□□ -1.64
SMOQ99835 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMOQ99835 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
SMOQ99835 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SMOQ99835 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMOQ99835 OR10J6P-201ENST00000289731 930 ntBASIC4.83□□□□□ -1.64
SMOQ99835 RNU4-44P-201ENST00000363050 141 ntBASIC4.83□□□□□ -1.64
SMOQ99835 PRRC2CP1-201ENST00000404428 159 ntBASIC4.83□□□□□ -1.64
SMOQ99835 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMOQ99835 AL078604.1-201ENST00000404609 466 ntBASIC4.83□□□□□ -1.64
SMOQ99835 RNU2-66P-201ENST00000410650 161 ntBASIC4.83□□□□□ -1.64
SMOQ99835 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.83□□□□□ -1.64
SMOQ99835 RPS27AP7-201ENST00000422792 455 ntBASIC4.83□□□□□ -1.64
SMOQ99835 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.83□□□□□ -1.64
SMOQ99835 AL512649.1-201ENST00000428997 581 ntBASIC4.83□□□□□ -1.64
SMOQ99835 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.83□□□□□ -1.64
SMOQ99835 AC068287.1-201ENST00000430283 295 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms