Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC009302.1-201ENST00000417147 390 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL513325.1-201ENST00000417716 1034 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LITAFQ99732 GLRXP1-201ENST00000423261 334 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 Z74021.1-201ENST00000423610 407 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL662874.1-201ENST00000426065 230 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 RPS3AP54-201ENST00000435535 734 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 CYCSP12-201ENST00000437729 300 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 PRPF38AP2-201ENST00000438179 851 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC002381.1-201ENST00000447049 280 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 GAPDHP17-201ENST00000449858 1001 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 USP9YP34-201ENST00000453983 808 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 RPL36AP55-201ENST00000454114 305 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 snoU13.7-201ENST00000459220 104 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC068228.1-201ENST00000461723 211 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC010469.1-201ENST00000463864 576 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 HMGB1P36-201ENST00000487709 576 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC114781.3-201ENST00000512083 142 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC104057.1-201ENST00000515547 497 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 MYL12AP1-201ENST00000518490 515 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC022861.1-201ENST00000522981 663 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.28□□□□□ -1.88
LITAFQ99732 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.28□□□□□ -1.88
LITAFQ99732 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC063949.1-201ENST00000552900 865 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.28□□□□□ -1.88
LITAFQ99732 RN7SL66P-201ENST00000582099 264 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC209154.1-201ENST00000582156 337 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 ELOCP28-201ENST00000590044 317 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.28□□□□□ -1.88
LITAFQ99732 TPMTP1-201ENST00000592307 737 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC103792.1-201ENST00000603591 919 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC091965.4-201ENST00000607691 587 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC000068.2-201ENST00000608816 460 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL159169.3-201ENST00000608871 561 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC091304.9-201ENST00000612091 226 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 uc_338.29-201ENST00000615099 168 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 MIR6864-201ENST00000617935 70 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC072046.2-201ENST00000618366 268 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL445264.1-201ENST00000621719 171 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AC124864.2-201ENST00000624736 186 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL157786.1-207ENST00000627771 695 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LITAFQ99732 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 ELF2P3-201ENST00000445099 1506 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.28□□□□□ -1.88
LITAFQ99732 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LITAFQ99732 AC104966.1-201ENST00000467010 1464 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.28□□□□□ -1.89
LITAFQ99732 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.28□□□□□ -1.89
LITAFQ99732 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.28□□□□□ -1.89
LITAFQ99732 MAPK10-303ENST00000641324 3959 ntBASIC3.27□□□□□ -1.89
LITAFQ99732 AL592182.3-201ENST00000642132 3304 ntBASIC3.27□□□□□ -1.89
LITAFQ99732 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LITAFQ99732 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
LITAFQ99732 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LITAFQ99732 AL138820.1-201ENST00000617901 5305 ntBASIC3.27□□□□□ -1.89
LITAFQ99732 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.27□□□□□ -1.89
LITAFQ99732 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LITAFQ99732 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.27□□□□□ -1.89
LITAFQ99732 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.27□□□□□ -1.89
LITAFQ99732 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LITAFQ99732 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LITAFQ99732 OR14L1P-202ENST00000641545 3009 ntBASIC3.27□□□□□ -1.89
LITAFQ99732 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LITAFQ99732 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
LITAFQ99732 AL445487.1-201ENST00000415694 1580 ntBASIC3.27□□□□□ -1.89
LITAFQ99732 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LITAFQ99732 TLK1P1-201ENST00000456760 2440 ntBASIC3.27□□□□□ -1.89
LITAFQ99732 AC130650.2-201ENST00000618736 2403 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms