Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SLC31A1P1-201ENST00000451221 567 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RPL18AP17-201ENST00000455326 198 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RN7SL354P-201ENST00000469282 294 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC112198.1-201ENST00000505369 1220 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC091435.1-201ENST00000505442 584 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 LTV1P1-201ENST00000510683 1237 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC007448.1-201ENST00000582714 234 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AP001521.1-201ENST00000609150 300 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC073114.1-201ENST00000612027 490 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC008443.7-201ENST00000622195 246 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC091905.2-201ENST00000623143 306 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC092184.1-201ENST00000625042 715 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 MFSD8-242ENST00000641690 4199 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 KARSP3-201ENST00000571212 1504 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 RNU1-85P-201ENST00000364127 164 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6-657P-201ENST00000383904 107 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 Y_RNA.436-201ENST00000384097 102 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AL049697.2-201ENST00000403708 294 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 VDAC1P9-201ENST00000412766 841 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 BTF3L4P1-201ENST00000413813 468 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 HSFY4P-201ENST00000415994 1181 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AL139811.1-201ENST00000424779 2299 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 VDAC1P6-201ENST00000430062 855 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 RPL36P19-201ENST00000430744 301 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC129850.1-201ENST00000436203 508 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 MTND2P20-201ENST00000440805 661 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC073587.1-201ENST00000447093 876 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AL162591.2-201ENST00000449634 317 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 CEACAMP6-201ENST00000452007 574 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 OR6C5P-201ENST00000452388 923 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 MTND2P28-201ENST00000457540 1044 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC080014.1-201ENST00000496877 1201 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC231760.1-201ENST00000498002 260 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 MTCYBP17-201ENST00000503579 789 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 DSTNP2-201ENST00000504533 515 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 PTP4A1P6-201ENST00000531034 478 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 CYCSP28-201ENST00000534284 321 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC022893.2-201ENST00000564832 3296 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 SNORD39.3-201ENST00000584451 71 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 WISP1-OT1-201ENST00000602893 642 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC103792.1-201ENST00000603591 919 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC069304.2-201ENST00000605154 435 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 AC113194.1-201ENST00000606037 500 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 PCMTD1P7-201ENST00000634506 357 ntBASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP3Q96JB5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC090229.1-201ENST00000590983 1609 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 MIR506-201ENST00000384998 124 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 CYCSP45-201ENST00000402289 315 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms