Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 RPL7P26-201ENST00000333817 754 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AL589994.1-201ENST00000404962 340 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC013410.1-201ENST00000436223 1232 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AL713998.2-201ENST00000604538 1198 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AL365503.1-201ENST00000605247 905 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC100793.4-201ENST00000613683 429 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC008264.1-201ENST00000447612 367 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC010468.1-201ENST00000461022 817 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC092868.3-201ENST00000560515 784 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AL049844.2-201ENST00000604280 628 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC093732.2-201ENST00000607950 274 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AC008121.2-201ENST00000614647 523 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 AL356490.1-201ENST00000623079 479 ntBASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.3□□□□□ -1.88
SHROOM3Q8TF72 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 RNU1-140P-201ENST00000365040 165 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 RNA5SP80-201ENST00000410475 111 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 RNU2-22P-201ENST00000411266 212 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC003685.2-201ENST00000422795 395 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 TXNP1-201ENST00000441872 371 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC138393.1-206ENST00000540997 1886 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 RN7SKP285-201ENST00000410137 318 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC093698.1-201ENST00000423843 571 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC087312.1-201ENST00000471411 480 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC009101.1-201ENST00000568135 242 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC010615.3-201ENST00000597319 394 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 BDH2P1-201ENST00000602288 736 ntBASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM3Q8TF72 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AL031679.1-201ENST00000400616 525 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 RNU6-775P-201ENST00000459318 96 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 SNORD116-30-201ENST00000516468 85 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AC131238.1-201ENST00000617135 328 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 AL391597.1-201ENST00000618707 694 ntBASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHROOM3Q8TF72 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC004801.2-202ENST00000463559 283 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms