Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MRPS31P2-201ENST00000451581 518 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC010307.1-201ENST00000467206 836 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC005798.1-201ENST00000513715 387 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC092851.1-201ENST00000535964 478 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC010095.1-201ENST00000443543 144 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 RPS27AP18-201ENST00000515536 459 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC079089.3-201ENST00000603094 673 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AL356057.1-202ENST00000402263 756 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 NPM1P11-201ENST00000417106 855 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC009963.1-201ENST00000417265 157 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 RPL6P21-201ENST00000418672 846 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 RPL35AP12-201ENST00000425362 338 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 RPS20P32-201ENST00000456044 356 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC087312.1-201ENST00000471411 480 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC126389.1-201ENST00000477436 290 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC068657.1-201ENST00000520807 306 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 CYCSP39-201ENST00000565821 309 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AP002967.1-201ENST00000624203 539 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC244205.2-202ENST00000635781 342 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AL513302.2-201ENST00000562313 1842 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 MUC2-202ENST00000613187 4845 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 NPM1P39-201ENST00000449818 867 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 RN7SKP209-201ENST00000516888 304 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AP002404.1-201ENST00000532005 451 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AL732372.2-225ENST00000642124 456 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC087190.4-201ENST00000574616 8334 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AP000936.3-201ENST00000438127 255 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC245517.2-201ENST00000442890 346 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 EXTL2P1-201ENST00000446218 416 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC128713.1-201ENST00000471495 306 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AP000893.1-201ENST00000474462 794 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC087888.1-201ENST00000550884 1254 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC234778.2-201ENST00000566241 354 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 UBL5P2-201ENST00000583788 219 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC006557.5-201ENST00000603126 811 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 MIR6715B-201ENST00000637172 77 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC138393.1-206ENST00000540997 1886 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC107027.3-201ENST00000565095 3473 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 CR381670.1-201ENST00000624291 1693 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 RNU6-328P-201ENST00000390887 106 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 RNU4-47P-201ENST00000410876 114 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AL139413.1-201ENST00000421309 217 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ETF1P3-201ENST00000430422 1160 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AP002812.4-201ENST00000532139 286 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC024153.1-201ENST00000603103 365 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AL162574.2-201ENST00000614618 657 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 RPL21P109-201ENST00000422213 475 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 282.3 ms