Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.73□□□□□ -1.49
PHC3Q8NDX5 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PHC3Q8NDX5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
PHC3Q8NDX5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.73□□□□□ -1.49
PHC3Q8NDX5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC092376.2-201ENST00000622621 4116 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 RN7SKP185-201ENST00000362813 326 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 RNU6-1097P-201ENST00000363586 107 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 Y_RNA.157-201ENST00000363638 102 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 RNU6-108P-201ENST00000365558 107 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 RNU6-767P-201ENST00000384132 107 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 SNORA11.3-201ENST00000408471 128 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 OR9R1P-201ENST00000412200 877 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 MRPL53P1-201ENST00000414323 319 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 RPS15AP12-201ENST00000419498 388 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC137499.1-201ENST00000427602 88 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AL136231.1-201ENST00000429407 730 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 SLC25A18P1-201ENST00000449385 454 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC093166.4-201ENST00000457867 318 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC010486.1-201ENST00000511793 424 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC107934.1-201ENST00000522215 217 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC024224.1-201ENST00000538284 609 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC068790.3-201ENST00000602988 553 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC009233.1-201ENST00000616477 371 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC126175.1-201ENST00000617041 758 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 SNORA11.6-201ENST00000619030 128 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 AC239868.2-201ENST00000564237 4527 ntBASIC5.72□□□□□ -1.49
PHC3Q8NDX5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PHC3Q8NDX5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.71□□□□□ -1.49
PHC3Q8NDX5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHC3Q8NDX5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.71□□□□□ -1.49
PHC3Q8NDX5 MTND5P33-201ENST00000571250 1450 ntBASIC5.71□□□□□ -1.49
PHC3Q8NDX5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 AP004607.3-201ENST00000530354 3915 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 OR52B3P-201ENST00000314715 928 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RNU1-150P-201ENST00000362491 162 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RNU4-73P-201ENST00000363164 141 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RNU4-1-201ENST00000363925 141 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RNA5SP510-201ENST00000364697 99 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RPS3AP2-201ENST00000407190 754 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RN7SKP235-201ENST00000410662 305 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RNU6-603P-201ENST00000411403 107 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RPS20P15-201ENST00000412792 311 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 UQCRBP1-201ENST00000421129 336 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 RGS17P1-201ENST00000423358 553 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 OR2B7P-201ENST00000429302 934 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 AL606489.2-201ENST00000433886 234 ntBASIC5.71□□□□□ -1.5
PHC3Q8NDX5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC3Q8NDX5 AC006335.2-201ENST00000437993 330 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms