Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 METTL21EP-201ENST00000298105 713 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU1-20P-201ENST00000363314 162 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 U3.4-201ENST00000363352 213 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU6-1320P-201ENST00000390838 107 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU6-1269P-201ENST00000391139 107 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 VDAC2P1-201ENST00000399358 958 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 DNAJC19P6-201ENST00000401853 280 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RPL21P65-201ENST00000406094 466 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RN7SKP142-201ENST00000411236 328 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC013404.1-201ENST00000413068 249 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 DPPA2P1-201ENST00000428060 556 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC007389.2-201ENST00000434630 306 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 MTCYBP34-201ENST00000439552 670 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 ARAFP2-201ENST00000440565 559 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RPL23AP76-201ENST00000441860 458 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 ZNF114P1-201ENST00000453500 292 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 AL035407.2-201ENST00000454090 378 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU6-599P-201ENST00000459383 107 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU6-1193P-201ENST00000459461 107 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 VN1R105P-201ENST00000486595 910 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC012414.6-201ENST00000568241 401 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC006539.2-201ENST00000601729 572 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 U73023.1-201ENST00000603134 700 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC069200.1-201ENST00000609511 323 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 FAM27D1-201ENST00000612308 341 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU6-368P-201ENST00000620928 107 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 RNU6-538P-201ENST00000622329 107 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 AC026523.2-201ENST00000625039 7739 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC000374.1-201ENST00000434698 1745 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 TTC39DP-201ENST00000416781 1688 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 RNU6-1119P-201ENST00000384349 108 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RNU6-185P-201ENST00000384421 107 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 PEX12P1-201ENST00000400284 1048 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RPL37P1-201ENST00000432310 284 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 Z74696.2-201ENST00000436514 498 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 CACYBPP1-201ENST00000438592 684 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 MTND3P1-201ENST00000441336 220 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 HMGB1P48-201ENST00000446155 598 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AL671855.1-201ENST00000446875 1203 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 TPT1P7-201ENST00000458300 517 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC021205.1-201ENST00000468797 348 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC037198.2-201ENST00000478845 733 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RPL9P33-201ENST00000484311 566 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RN7SL812P-201ENST00000493791 279 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC008837.2-201ENST00000513076 418 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RNA5SP73-201ENST00000516744 108 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC016957.1-201ENST00000534895 309 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 ROCK1P1-201ENST00000573767 549 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 MTCO1P40-201ENST00000574371 625 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 MTND1P15-201ENST00000579262 949 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC021749.1-201ENST00000604322 607 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 RNU4-89P-201ENST00000607443 133 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC011472.4-201ENST00000615848 491 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 U6atac.1-201ENST00000616025 117 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AL607023.1-201ENST00000620045 248 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC007546.2-201ENST00000623996 360 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 AF001550.2-201ENST00000636643 217 ntBASIC5.34□□□□□ -1.55
SYNE4Q8N205 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNE4Q8N205 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SYNE4Q8N205 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.34□□□□□ -1.56
SYNE4Q8N205 AL133243.3-201ENST00000617415 3004 ntBASIC5.34□□□□□ -1.56
SYNE4Q8N205 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms