Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MAPK10-253ENST00000641010 4072 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 MTND4P34-201ENST00000572715 1371 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC109780.1-201ENST00000451768 1344 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC109315.1-201ENST00000584143 1347 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 RNU6-560P-201ENST00000364007 108 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 RN7SKP15-201ENST00000364742 309 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 RNU6-413P-201ENST00000384115 107 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 SNORD116-12-201ENST00000384468 92 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 CYB5AP4-201ENST00000396692 399 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 HMGB1P17-201ENST00000403495 628 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 RNU4-65P-201ENST00000410473 140 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AMD1P2-201ENST00000412936 992 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL161449.1-201ENST00000414531 1199 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 GLRXP1-201ENST00000423261 334 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC017083.1-201ENST00000428093 483 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC079807.1-201ENST00000429993 481 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 TPTE2P3-201ENST00000441562 1189 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL662791.1-201ENST00000441992 928 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL589880.1-201ENST00000448271 287 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC012671.1-201ENST00000451912 203 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 OFD1P3Y-201ENST00000453312 783 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC104164.3-201ENST00000467363 1258 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC011979.1-201ENST00000472300 483 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 ACTG1P13-201ENST00000486987 1043 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 UBE2CP3-201ENST00000502715 450 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC114322.1-201ENST00000506771 926 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC113420.1-201ENST00000507903 571 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC006390.1-201ENST00000508068 283 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC021146.1-201ENST00000511202 716 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 SCARNA1-201ENST00000517138 166 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC104986.1-201ENST00000517978 436 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC138701.1-201ENST00000524329 714 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 OR4P1P-201ENST00000530808 1136 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL139174.1-201ENST00000531489 886 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 GCSHP4-201ENST00000538792 439 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC008033.2-201ENST00000542626 177 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 HAUS8P1-201ENST00000549005 542 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 BNIP3P26-201ENST00000600827 554 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC090181.2-201ENST00000602975 672 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 SUMO2P15-201ENST00000604285 278 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL365400.2-201ENST00000605604 902 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC103710.3-201ENST00000608157 948 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL031666.3-201ENST00000609320 1006 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AL445423.1-201ENST00000609941 536 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC018755.4-201ENST00000619715 454 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 AC103858.2-201ENST00000621471 543 ntBASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.03□□□□□ -1.92
LINC01561Q8N1V8 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.03□□□□□ -1.93
LINC01561Q8N1V8 SDAD1P1-202ENST00000524156 2051 ntBASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 RPL23P2-201ENST00000320371 421 ntBASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 RNU6-1122P-201ENST00000384449 107 ntBASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 AL590084.1-201ENST00000407885 387 ntBASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 AC093162.1-201ENST00000419682 124 ntBASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.02□□□□□ -1.93
LINC01561Q8N1V8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms