Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NHLRC1Q6VVB1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SNORA31-201ENST00000362607 130 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SNORA51.2-201ENST00000364595 132 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 RNU6-707P-201ENST00000364647 95 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 RNU6-339P-201ENST00000384310 107 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SNORA37-201ENST00000384504 129 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 RPL23AP48-201ENST00000406913 488 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 RNU2-28P-201ENST00000410457 189 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 RPS23P10-201ENST00000416185 486 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC092634.6-201ENST00000418558 192 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 COX6CP17-201ENST00000421389 185 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 CBX1P1-201ENST00000440184 427 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 TPT1P12-201ENST00000448968 492 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AL133477.1-201ENST00000457472 514 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC011276.1-201ENST00000469688 323 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 RPL23AP2-201ENST00000471227 466 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC041039.1-201ENST00000485656 536 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC096571.1-202ENST00000506634 735 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AL592156.1-201ENST00000508758 304 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC008958.1-201ENST00000511047 682 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SNORA48.10-201ENST00000516965 160 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 OR5M7P-201ENST00000526140 972 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AP000790.1-201ENST00000528891 737 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AP000240.1-201ENST00000609910 452 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC005332.6-201ENST00000613178 446 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC073968.1-201ENST00000618594 637 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC233309.1-201ENST00000619522 751 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AC009269.6-201ENST00000621778 588 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AL391262.2-201ENST00000622466 494 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 AL356121.2-201ENST00000624715 780 ntBASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NHLRC1Q6VVB1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 Y_RNA.25-201ENST00000362528 102 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 RNU6-335P-201ENST00000364563 113 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 MIR506-201ENST00000384998 124 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 P2RY10P2-201ENST00000416730 913 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AL161631.1-201ENST00000417933 486 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 OSTCP5-201ENST00000425293 453 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 C4BPAP2-201ENST00000428434 478 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 DNAJC19P7-201ENST00000428811 344 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 GTF2IP7-202ENST00000436677 309 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AL121877.1-201ENST00000453704 622 ntBASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.78□□□□□ -1.8
NHLRC1Q6VVB1 RPL21P104-201ENST00000464143 478 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms