Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 U3.2-201ENST00000362981 210 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 RNU4-24P-201ENST00000364565 139 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 RNU2-15P-201ENST00000410692 191 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC109780.2-201ENST00000413467 845 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 PDSS1P1-201ENST00000422953 1114 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 RPL37P21-201ENST00000435890 276 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 HMGB1P15-201ENST00000453854 435 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 SNRPGP9-201ENST00000456025 225 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 SIAH1P1-201ENST00000479411 923 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 RPL7P39-201ENST00000481157 744 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC010424.1-201ENST00000506336 297 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 MTND4P2-201ENST00000507767 1203 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 TMEM248P1-201ENST00000510579 951 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC034159.1-201ENST00000513885 583 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 RN7SKP116-201ENST00000516902 319 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 MYL12AP1-201ENST00000518490 515 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC013828.2-201ENST00000532487 235 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC024224.1-201ENST00000538284 609 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC091489.2-201ENST00000566263 604 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 MIR544B-201ENST00000582372 78 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 HMGB2P1-201ENST00000591146 634 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 FKBP1AP1-201ENST00000594588 318 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AP000403.1-201ENST00000603349 851 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 PRELID3BP8-201ENST00000604148 295 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 IMMP1LP3-201ENST00000604197 224 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC068276.1-201ENST00000605793 379 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AC025048.6-202ENST00000627667 438 ntBASIC4.7□□□□□ -1.66
RNF220Q5VTB9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 MTND4P4-201ENST00000439033 1366 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 RNU1-108P-201ENST00000362556 161 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SNORA17.1-201ENST00000362945 126 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 RN7SKP160-201ENST00000363804 340 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 RNU6-343P-201ENST00000364709 104 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 RNU4-91P-201ENST00000364778 135 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 RNU6-761P-201ENST00000384148 107 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 MIR600-201ENST00000385007 98 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 U3.25-201ENST00000391209 220 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL355379.1-201ENST00000405542 640 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC007742.1-201ENST00000425789 329 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 CKS1BP5-201ENST00000434172 273 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC093414.1-201ENST00000434712 514 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 ELOCP26-201ENST00000436067 329 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 SDCBPP1-201ENST00000440192 890 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 TDGF1P1-201ENST00000445734 527 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 PPIAP3-201ENST00000450588 505 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC009963.2-201ENST00000453431 138 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms