Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC026951.1-201ENST00000559530 2459 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 SNORD65.1-201ENST00000390889 71 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 RPS4XP9-201ENST00000405151 780 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL139421.1-201ENST00000423010 169 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 ATP5F1P1-201ENST00000433775 569 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 RPL21P133-201ENST00000443666 476 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC073387.1-201ENST00000453261 709 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL445669.2-201ENST00000454425 421 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL109741.2-201ENST00000455561 343 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC010307.1-201ENST00000467206 836 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 MTND3P7-201ENST00000474435 343 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 RN7SL817P-201ENST00000480777 288 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 LINC00888-204ENST00000487386 421 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC104090.1-201ENST00000506341 1171 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 MTND1P22-201ENST00000510572 951 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC117532.1-201ENST00000514638 323 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC104057.1-201ENST00000515547 497 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 RNU6-232P-201ENST00000517144 64 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 MTCO1P49-201ENST00000523429 802 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 HIGD1AP17-201ENST00000554576 276 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 GTF2IP8-201ENST00000560687 584 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 ATP5J2P6-201ENST00000565203 266 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC105129.3-201ENST00000605455 485 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AC124312.4-201ENST00000605533 310 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 AL713922.2-201ENST00000619384 716 ntBASIC5.22□□□□□ -1.57
LONRF3Q496Y0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LONRF3Q496Y0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
LONRF3Q496Y0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LONRF3Q496Y0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 U3.22-201ENST00000391120 215 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL049697.2-201ENST00000403708 294 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL023807.1-201ENST00000407932 359 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 RPL23AP47-201ENST00000408017 460 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 NRBF2P2-201ENST00000413087 861 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 COX6CP17-201ENST00000421389 185 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 USP9YP31-201ENST00000431405 881 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL354941.1-201ENST00000438600 464 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 RPS27AP8-201ENST00000452665 445 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 MTND2P28-201ENST00000457540 1044 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 XKRY-201ENST00000510392 1100 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 FTH1P9-201ENST00000513251 355 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC005798.1-201ENST00000513715 387 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 HIGD1AP3-201ENST00000515857 278 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 RNU6-759P-201ENST00000516740 103 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 SNORA48.10-201ENST00000516965 160 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 ARL2BPP5-201ENST00000523141 481 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 RPL21P7-201ENST00000557463 483 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AC073091.2-201ENST00000603205 907 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 OR2AS2P-201ENST00000606902 342 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL451074.6-201ENST00000608512 729 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL139418.1-201ENST00000613613 177 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL158196.1-201ENST00000616786 434 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 AL391684.1-202ENST00000641293 1636 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms