Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC3.13□□□□□ -1.91
LAMA3Q16787 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
LAMA3Q16787 CR381670.1-201ENST00000624291 1693 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 MAPK10-286ENST00000641208 8747 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC3.13□□□□□ -1.91
LAMA3Q16787 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.13□□□□□ -1.91
LAMA3Q16787 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 EIF4EP1-201ENST00000422311 642 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 PRDX3P4-201ENST00000470828 747 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.13□□□□□ -1.91
LAMA3Q16787 DPRXP4-201ENST00000578053 568 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 AC010680.4-201ENST00000605334 543 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LAMA3Q16787 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LAMA3Q16787 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LAMA3Q16787 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 RPL7P26-201ENST00000333817 754 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.13□□□□□ -1.91
LAMA3Q16787 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.13□□□□□ -1.91
LAMA3Q16787 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.13□□□□□ -1.91
LAMA3Q16787 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.13□□□□□ -1.91
LAMA3Q16787 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAMA3Q16787 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.12□□□□□ -1.91
LAMA3Q16787 RPS26P47-201ENST00000427219 348 ntBASIC3.12□□□□□ -1.91
LAMA3Q16787 AC004057.1-201ENST00000485827 348 ntBASIC3.12□□□□□ -1.91
LAMA3Q16787 RPS26P15-201ENST00000488067 348 ntBASIC3.12□□□□□ -1.91
LAMA3Q16787 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.12□□□□□ -1.91
LAMA3Q16787 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.12□□□□□ -1.91
LAMA3Q16787 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
LAMA3Q16787 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LAMA3Q16787 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LAMA3Q16787 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LAMA3Q16787 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
LAMA3Q16787 SYT14P1-202ENST00000600441 1448 ntBASIC3.12□□□□□ -1.91
LAMA3Q16787 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LAMA3Q16787 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LAMA3Q16787 RN7SKP283-201ENST00000517197 270 ntBASIC3.12□□□□□ -1.91
LAMA3Q16787 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.12□□□□□ -1.91
LAMA3Q16787 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LAMA3Q16787 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LAMA3Q16787 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.11□□□□□ -1.91
LAMA3Q16787 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.11□□□□□ -1.91
LAMA3Q16787 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
LAMA3Q16787 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 AC048351.1-201ENST00000420064 602 ntBASIC3.11□□□□□ -1.91
LAMA3Q16787 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LAMA3Q16787 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.11□□□□□ -1.91
LAMA3Q16787 AC078814.3-201ENST00000553036 491 ntBASIC3.11□□□□□ -1.91
LAMA3Q16787 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.11□□□□□ -1.91
LAMA3Q16787 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.11□□□□□ -1.91
LAMA3Q16787 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.11□□□□□ -1.91
LAMA3Q16787 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
LAMA3Q16787 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA3Q16787 RNA5SP103-201ENST00000459503 118 ntBASIC3.11□□□□□ -1.91
LAMA3Q16787 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
LAMA3Q16787 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.11□□□□□ -1.91
LAMA3Q16787 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
LAMA3Q16787 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.11□□□□□ -1.91
LAMA3Q16787 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.1□□□□□ -1.91
LAMA3Q16787 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.1□□□□□ -1.91
LAMA3Q16787 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 AC009948.4-201ENST00000604692 675 ntBASIC3.1□□□□□ -1.91
LAMA3Q16787 PISRT1-201ENST00000626175 531 ntBASIC3.1□□□□□ -1.91
LAMA3Q16787 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.1□□□□□ -1.91
LAMA3Q16787 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.1□□□□□ -1.91
LAMA3Q16787 OR5AP1P-201ENST00000529730 940 ntBASIC3.1□□□□□ -1.91
LAMA3Q16787 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC3.1□□□□□ -1.91
LAMA3Q16787 MIR5047-201ENST00000579212 100 ntBASIC3.1□□□□□ -1.91
LAMA3Q16787 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.1□□□□□ -1.91
LAMA3Q16787 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.1□□□□□ -1.91
LAMA3Q16787 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.1□□□□□ -1.91
LAMA3Q16787 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.1□□□□□ -1.91
LAMA3Q16787 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA3Q16787 RNVU1-3-201ENST00000364313 161 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.09□□□□□ -1.91
LAMA3Q16787 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.09□□□□□ -1.91
LAMA3Q16787 MTND4P2-201ENST00000507767 1203 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.09□□□□□ -1.91
LAMA3Q16787 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.09□□□□□ -1.91
LAMA3Q16787 MIR4498-201ENST00000577599 66 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms