Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RIPK4P57078 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK4P57078 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RIPK4P57078 AC011155.1-201ENST00000316512 456 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK4P57078 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK4P57078 ETF1P3-201ENST00000430422 1160 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 RSL24D1P2-201ENST00000445584 366 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK4P57078 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.31□□□□□ -1.72
RIPK4P57078 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK4P57078 AL133244.1-201ENST00000456007 258 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 RN7SL807P-201ENST00000470923 297 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK4P57078 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.31□□□□□ -1.72
RIPK4P57078 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.31□□□□□ -1.72
RIPK4P57078 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK4P57078 AC087888.1-201ENST00000550884 1254 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK4P57078 MIR3908-201ENST00000579798 126 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK4P57078 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK4P57078 AC009032.1-201ENST00000617574 431 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 AC119674.1-220ENST00000641502 1048 ntBASIC4.31□□□□□ -1.72
RIPK4P57078 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK4P57078 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK4P57078 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RIPK4P57078 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK4P57078 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RIPK4P57078 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK4P57078 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.3□□□□□ -1.72
RIPK4P57078 AC093716.1-201ENST00000435923 377 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 MTCYBP29-201ENST00000436327 1006 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK4P57078 AL035551.1-201ENST00000446931 348 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK4P57078 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.3□□□□□ -1.72
RIPK4P57078 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.3□□□□□ -1.72
RIPK4P57078 RN7SKP60-201ENST00000516985 239 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.3□□□□□ -1.72
RIPK4P57078 HIGD1AP1-201ENST00000550979 275 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK4P57078 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK4P57078 MIR5680-201ENST00000577577 84 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.3□□□□□ -1.72
RIPK4P57078 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.3□□□□□ -1.72
RIPK4P57078 AC005021.1-201ENST00000608730 355 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 AL442067.2-201ENST00000614033 363 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 SNORD39.4-201ENST00000620099 78 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 RPL23AP61-201ENST00000623642 466 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 AC019080.5-201ENST00000624891 757 ntBASIC4.3□□□□□ -1.72
RIPK4P57078 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK4P57078 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.29□□□□□ -1.72
RIPK4P57078 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RIPK4P57078 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK4P57078 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK4P57078 AC093719.1-202ENST00000392735 373 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 MTCO3P31-201ENST00000405526 789 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 AL136131.1-201ENST00000406079 803 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 RPS7P13-201ENST00000413955 498 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 ARF4P2-201ENST00000430209 526 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 AC243772.1-201ENST00000451620 410 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.29□□□□□ -1.72
RIPK4P57078 TRBV8-2-201ENST00000475637 270 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.29□□□□□ -1.72
RIPK4P57078 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.29□□□□□ -1.72
RIPK4P57078 AC067904.2-201ENST00000517322 1283 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 AL139174.1-201ENST00000531489 886 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.29□□□□□ -1.72
RIPK4P57078 MTCO2P22-201ENST00000603246 681 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 AC079880.2-201ENST00000603790 1213 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 YPEL5P2-201ENST00000605553 359 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 AC073657.2-201ENST00000605661 303 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.29□□□□□ -1.72
RIPK4P57078 AC058791.1-201ENST00000608412 3198 ntBASIC4.29□□□□□ -1.72
RIPK4P57078 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK4P57078 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK4P57078 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK4P57078 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK4P57078 AC073346.2-201ENST00000624724 2058 ntBASIC4.28□□□□□ -1.72
RIPK4P57078 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK4P57078 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RIPK4P57078 RNU6-152P-201ENST00000384037 107 ntBASIC4.28□□□□□ -1.72
RIPK4P57078 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.28□□□□□ -1.72
RIPK4P57078 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms