Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AADACP1-206ENST00000561502 1193 ntBASIC4.06□□□□□ -1.76
CDH13P55290 MIR4715-201ENST00000584117 79 ntBASIC4.06□□□□□ -1.76
CDH13P55290 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 BNIP3P26-201ENST00000600827 554 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 LLPHP1-201ENST00000603571 367 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 AC005332.6-201ENST00000613178 446 ntBASIC4.06□□□□□ -1.76
CDH13P55290 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH13P55290 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 AC026951.1-201ENST00000559530 2459 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AL133412.1-201ENST00000380194 2992 ntBASIC4.06□□□□□ -1.76
CDH13P55290 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 MARK2P15-201ENST00000432204 2186 ntBASIC4.06□□□□□ -1.76
CDH13P55290 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 MFSD8-216ENST00000641147 4009 ntBASIC4.05□□□□□ -1.76
CDH13P55290 NMD3P1-201ENST00000439704 1488 ntBASIC4.05□□□□□ -1.76
CDH13P55290 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH13P55290 RNA5SP447-201ENST00000363749 119 ntBASIC4.05□□□□□ -1.76
CDH13P55290 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDH13P55290 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDH13P55290 MIR937-201ENST00000401271 86 ntBASIC4.05□□□□□ -1.76
CDH13P55290 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 SSR1P2-201ENST00000415208 787 ntBASIC4.05□□□□□ -1.76
CDH13P55290 P2RY10P2-201ENST00000416730 913 ntBASIC4.05□□□□□ -1.76
CDH13P55290 RPS12P23-201ENST00000419579 400 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH13P55290 MTCO2P17-201ENST00000424336 677 ntBASIC4.05□□□□□ -1.76
CDH13P55290 SDCBPP2-201ENST00000424643 885 ntBASIC4.05□□□□□ -1.76
CDH13P55290 RWDD4P2-201ENST00000426392 563 ntBASIC4.05□□□□□ -1.76
CDH13P55290 PSMA2P3-201ENST00000429685 675 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 RPS3AP54-201ENST00000435535 734 ntBASIC4.05□□□□□ -1.76
CDH13P55290 MTCO2P25-201ENST00000447065 681 ntBASIC4.05□□□□□ -1.76
CDH13P55290 TPT1P13-201ENST00000449760 499 ntBASIC4.05□□□□□ -1.76
CDH13P55290 PPIAP3-201ENST00000450588 505 ntBASIC4.05□□□□□ -1.76
CDH13P55290 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH13P55290 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 TRBV26-201ENST00000456572 344 ntBASIC4.05□□□□□ -1.76
CDH13P55290 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 AL592156.1-201ENST00000508758 304 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC093824.1-201ENST00000508796 343 ntBASIC4.05□□□□□ -1.76
CDH13P55290 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH13P55290 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH13P55290 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 AC092593.2-201ENST00000513866 913 ntBASIC4.05□□□□□ -1.76
CDH13P55290 MTCO1P30-201ENST00000515244 580 ntBASIC4.05□□□□□ -1.76
CDH13P55290 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
CDH13P55290 RNU6-1261P-201ENST00000517194 104 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH13P55290 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH13P55290 OR4A45P-201ENST00000529954 901 ntBASIC4.05□□□□□ -1.76
CDH13P55290 ZNF705CP-201ENST00000530515 889 ntBASIC4.05□□□□□ -1.76
CDH13P55290 OR4A12P-201ENST00000530847 918 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC005832.3-201ENST00000537929 631 ntBASIC4.05□□□□□ -1.76
CDH13P55290 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH13P55290 AC107016.1-201ENST00000550463 337 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC023813.2-201ENST00000564321 469 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AGGF1P5-201ENST00000567900 919 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH13P55290 AC107982.3-201ENST00000584957 985 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC010680.3-201ENST00000604215 520 ntBASIC4.05□□□□□ -1.76
CDH13P55290 RNA5SP108-201ENST00000605921 117 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC091946.2-201ENST00000606105 291 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 AC078899.5-201ENST00000612475 178 ntBASIC4.05□□□□□ -1.76
CDH13P55290 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 AC073348.1-201ENST00000623002 331 ntBASIC4.05□□□□□ -1.76
CDH13P55290 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CDH13P55290 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CDH13P55290 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CDH13P55290 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH13P55290 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDH13P55290 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 OR11H5P-202ENST00000641612 1325 ntBASIC4.04□□□□□ -1.76
CDH13P55290 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 AC103591.2-201ENST00000265259 766 ntBASIC4.04□□□□□ -1.76
CDH13P55290 RNU6-356P-201ENST00000384140 107 ntBASIC4.04□□□□□ -1.76
CDH13P55290 CYB5AP4-201ENST00000396692 399 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AL023807.1-201ENST00000407932 359 ntBASIC4.04□□□□□ -1.76
CDH13P55290 RPL23AP47-201ENST00000408017 460 ntBASIC4.04□□□□□ -1.76
CDH13P55290 SNORA3C-201ENST00000408792 125 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms