Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.04□□□□□ -1.44
USP11P51784 NMD3P1-201ENST00000439704 1488 ntBASIC6.04□□□□□ -1.44
USP11P51784 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 RNU1-146P-201ENST00000364015 165 ntBASIC6.04□□□□□ -1.44
USP11P51784 RNU6-1322P-201ENST00000364309 107 ntBASIC6.04□□□□□ -1.44
USP11P51784 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 SNORD115.1-201ENST00000391109 76 ntBASIC6.04□□□□□ -1.44
USP11P51784 AP000534.2-201ENST00000412729 568 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.04□□□□□ -1.44
USP11P51784 AC092634.6-201ENST00000418558 192 ntBASIC6.04□□□□□ -1.44
USP11P51784 RPL23AP4-201ENST00000427757 463 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC133104.1-201ENST00000429100 218 ntBASIC6.04□□□□□ -1.44
USP11P51784 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 AL365400.1-201ENST00000431854 640 ntBASIC6.04□□□□□ -1.44
USP11P51784 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 AC023347.2-201ENST00000433994 462 ntBASIC6.04□□□□□ -1.44
USP11P51784 SKP1P1-201ENST00000438081 489 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC092809.1-201ENST00000441469 474 ntBASIC6.04□□□□□ -1.44
USP11P51784 FGF7P3-201ENST00000454645 303 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.04□□□□□ -1.44
USP11P51784 MEMO1P3-201ENST00000459811 302 ntBASIC6.04□□□□□ -1.44
USP11P51784 RN7SL30P-201ENST00000488416 306 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.04□□□□□ -1.44
USP11P51784 RPS4XP20-201ENST00000505751 772 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC006390.1-201ENST00000508068 283 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.04□□□□□ -1.44
USP11P51784 SNORA19.2-201ENST00000516013 114 ntBASIC6.04□□□□□ -1.44
USP11P51784 RNU6-835P-201ENST00000516974 104 ntBASIC6.04□□□□□ -1.44
USP11P51784 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.04□□□□□ -1.44
USP11P51784 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.04□□□□□ -1.44
USP11P51784 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.04□□□□□ -1.44
USP11P51784 MIR3171-201ENST00000584270 74 ntBASIC6.04□□□□□ -1.44
USP11P51784 AC105429.2-201ENST00000610567 517 ntBASIC6.04□□□□□ -1.44
USP11P51784 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.04□□□□□ -1.44
USP11P51784 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 RLIMP2-201ENST00000427891 1563 ntBASIC6.04□□□□□ -1.44
USP11P51784 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USP11P51784 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.04□□□□□ -1.44
USP11P51784 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP11P51784 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
USP11P51784 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP11P51784 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP11P51784 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.03□□□□□ -1.44
USP11P51784 AL034549.2-201ENST00000618285 3373 ntBASIC6.03□□□□□ -1.44
USP11P51784 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP11P51784 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP11P51784 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
USP11P51784 LINC00561-201ENST00000565815 2738 ntBASIC6.03□□□□□ -1.44
USP11P51784 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 GNG5P1-201ENST00000255500 204 ntBASIC6.03□□□□□ -1.44
USP11P51784 OR5J1P-201ENST00000313544 939 ntBASIC6.03□□□□□ -1.44
USP11P51784 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
USP11P51784 SNORA5.1-201ENST00000384275 131 ntBASIC6.03□□□□□ -1.44
USP11P51784 AL354719.1-201ENST00000406535 843 ntBASIC6.03□□□□□ -1.44
USP11P51784 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 RNA5SP498-201ENST00000411342 120 ntBASIC6.03□□□□□ -1.44
USP11P51784 RPS7P15-201ENST00000415804 584 ntBASIC6.03□□□□□ -1.44
USP11P51784 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.03□□□□□ -1.44
USP11P51784 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 AL355433.1-201ENST00000422804 300 ntBASIC6.03□□□□□ -1.44
USP11P51784 BRK1P2-201ENST00000442875 223 ntBASIC6.03□□□□□ -1.44
USP11P51784 AL163193.1-201ENST00000444895 788 ntBASIC6.03□□□□□ -1.44
USP11P51784 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 AC104634.1-201ENST00000452720 462 ntBASIC6.03□□□□□ -1.44
USP11P51784 RN7SL172P-201ENST00000460535 303 ntBASIC6.03□□□□□ -1.44
USP11P51784 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP11P51784 AC022133.1-201ENST00000490961 571 ntBASIC6.03□□□□□ -1.44
USP11P51784 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 AC008638.1-201ENST00000506035 866 ntBASIC6.03□□□□□ -1.44
USP11P51784 AC103851.1-201ENST00000506833 274 ntBASIC6.03□□□□□ -1.44
USP11P51784 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.03□□□□□ -1.44
USP11P51784 RNU7-30P-201ENST00000516835 62 ntBASIC6.03□□□□□ -1.44
USP11P51784 RN7SKP116-201ENST00000516902 319 ntBASIC6.03□□□□□ -1.44
USP11P51784 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.03□□□□□ -1.44
USP11P51784 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.03□□□□□ -1.44
USP11P51784 AL355836.1-201ENST00000555951 870 ntBASIC6.03□□□□□ -1.44
USP11P51784 AC034105.3-201ENST00000565294 442 ntBASIC6.03□□□□□ -1.44
USP11P51784 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.03□□□□□ -1.44
USP11P51784 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.03□□□□□ -1.44
USP11P51784 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
USP11P51784 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.03□□□□□ -1.44
USP11P51784 AC113139.1-201ENST00000605049 239 ntBASIC6.03□□□□□ -1.44
USP11P51784 AL158196.1-201ENST00000616786 434 ntBASIC6.03□□□□□ -1.44
USP11P51784 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.03□□□□□ -1.44
USP11P51784 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
USP11P51784 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP11P51784 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms