Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ST13P20-201ENST00000447996 1065 ntBASIC5.54□□□□□ -1.52
MRE11P49959 RPL36AP33-201ENST00000450395 310 ntBASIC5.54□□□□□ -1.52
MRE11P49959 SNRPGP9-201ENST00000456025 225 ntBASIC5.54□□□□□ -1.52
MRE11P49959 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.54□□□□□ -1.52
MRE11P49959 MTND1P16-201ENST00000465177 898 ntBASIC5.54□□□□□ -1.52
MRE11P49959 AC072039.1-201ENST00000477611 581 ntBASIC5.54□□□□□ -1.52
MRE11P49959 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MRE11P49959 PPBPP1-201ENST00000510807 373 ntBASIC5.54□□□□□ -1.52
MRE11P49959 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.54□□□□□ -1.52
MRE11P49959 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.54□□□□□ -1.52
MRE11P49959 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.54□□□□□ -1.52
MRE11P49959 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
MRE11P49959 MED28P5-201ENST00000528254 438 ntBASIC5.54□□□□□ -1.52
MRE11P49959 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.54□□□□□ -1.52
MRE11P49959 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.54□□□□□ -1.52
MRE11P49959 MIR4737-201ENST00000583979 81 ntBASIC5.54□□□□□ -1.52
MRE11P49959 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MRE11P49959 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
MRE11P49959 AL008729.2-201ENST00000606393 473 ntBASIC5.54□□□□□ -1.52
MRE11P49959 AC011472.4-201ENST00000615848 491 ntBASIC5.54□□□□□ -1.52
MRE11P49959 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MRE11P49959 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.54□□□□□ -1.52
MRE11P49959 AC244258.1-201ENST00000637553 1071 ntBASIC5.54□□□□□ -1.52
MRE11P49959 AC119674.1-212ENST00000641155 993 ntBASIC5.54□□□□□ -1.52
MRE11P49959 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MRE11P49959 AC087190.4-201ENST00000574616 8334 ntBASIC5.54□□□□□ -1.52
MRE11P49959 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.54□□□□□ -1.52
MRE11P49959 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MRE11P49959 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MRE11P49959 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
MRE11P49959 CASC19-284ENST00000642142 1868 ntBASIC5.54□□□□□ -1.52
MRE11P49959 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
MRE11P49959 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
MRE11P49959 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 Y_RNA.408-201ENST00000383987 102 ntBASIC5.53□□□□□ -1.52
MRE11P49959 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 RNU6-77P-201ENST00000410554 91 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AL161449.1-201ENST00000414531 1199 ntBASIC5.53□□□□□ -1.52
MRE11P49959 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.53□□□□□ -1.52
MRE11P49959 AC234779.1-201ENST00000425910 285 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 AP001324.1-201ENST00000428553 399 ntBASIC5.53□□□□□ -1.52
MRE11P49959 BX323845.1-201ENST00000432417 179 ntBASIC5.53□□□□□ -1.52
MRE11P49959 RPL7P29-201ENST00000437151 728 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.53□□□□□ -1.52
MRE11P49959 AP000936.3-201ENST00000438127 255 ntBASIC5.53□□□□□ -1.52
MRE11P49959 RBMX2P4-201ENST00000441256 376 ntBASIC5.53□□□□□ -1.52
MRE11P49959 Z95327.1-201ENST00000446082 482 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AL359073.1-201ENST00000448036 403 ntBASIC5.53□□□□□ -1.52
MRE11P49959 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 AC012158.1-204ENST00000483430 465 ntBASIC5.53□□□□□ -1.52
MRE11P49959 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 AC096751.1-202ENST00000502691 1067 ntBASIC5.53□□□□□ -1.52
MRE11P49959 DYNLL1P6-201ENST00000503440 264 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 RNU6-416P-201ENST00000516265 103 ntBASIC5.53□□□□□ -1.52
MRE11P49959 RNU6-941P-201ENST00000516346 108 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 IGLV3-26-201ENST00000520756 302 ntBASIC5.53□□□□□ -1.52
MRE11P49959 IGJP1-201ENST00000522682 475 ntBASIC5.53□□□□□ -1.52
MRE11P49959 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.53□□□□□ -1.52
MRE11P49959 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.53□□□□□ -1.52
MRE11P49959 AC093227.2-201ENST00000589357 285 ntBASIC5.53□□□□□ -1.52
MRE11P49959 RPL7P50-201ENST00000600588 727 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC245389.1-201ENST00000605141 529 ntBASIC5.53□□□□□ -1.52
MRE11P49959 NDUFA8P1-201ENST00000605525 367 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC093799.2-201ENST00000610062 578 ntBASIC5.53□□□□□ -1.52
MRE11P49959 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 AL049794.2-201ENST00000616301 365 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC021106.3-201ENST00000623925 531 ntBASIC5.53□□□□□ -1.52
MRE11P49959 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 AC074101.1-201ENST00000637861 241 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AC099063.3-201ENST00000642066 185 ntBASIC5.53□□□□□ -1.52
MRE11P49959 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.53□□□□□ -1.52
MRE11P49959 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.53□□□□□ -1.52
MRE11P49959 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.53□□□□□ -1.52
MRE11P49959 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.53□□□□□ -1.52
MRE11P49959 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MRE11P49959 AC092447.7-201ENST00000422212 1621 ntBASIC5.52□□□□□ -1.53
MRE11P49959 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
MRE11P49959 DCAF13P3-201ENST00000561147 1334 ntBASIC5.52□□□□□ -1.53
MRE11P49959 SMG1P6-201ENST00000532337 2930 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MRE11P49959 Y_RNA.311-201ENST00000365068 96 ntBASIC5.52□□□□□ -1.53
MRE11P49959 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms