Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.82□□□□□ -1.8
CASP4P49662 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CASP4P49662 TRBV8-2-201ENST00000475637 270 ntBASIC3.82□□□□□ -1.8
CASP4P49662 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.82□□□□□ -1.8
CASP4P49662 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.82□□□□□ -1.8
CASP4P49662 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.82□□□□□ -1.8
CASP4P49662 RNU2-27P-201ENST00000516185 142 ntBASIC3.82□□□□□ -1.8
CASP4P49662 SNORA67.7-201ENST00000516664 135 ntBASIC3.82□□□□□ -1.8
CASP4P49662 AC026403.1-201ENST00000518938 295 ntBASIC3.82□□□□□ -1.8
CASP4P49662 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.82□□□□□ -1.8
CASP4P49662 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.82□□□□□ -1.8
CASP4P49662 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.82□□□□□ -1.8
CASP4P49662 MIR3158-1-201ENST00000583596 81 ntBASIC3.82□□□□□ -1.8
CASP4P49662 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.82□□□□□ -1.8
CASP4P49662 AC006116.10-201ENST00000591836 581 ntBASIC3.82□□□□□ -1.8
CASP4P49662 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CASP4P49662 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.82□□□□□ -1.8
CASP4P49662 BNIP3P38-201ENST00000601117 544 ntBASIC3.82□□□□□ -1.8
CASP4P49662 OR4H6P-202ENST00000603819 340 ntBASIC3.82□□□□□ -1.8
CASP4P49662 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CASP4P49662 AC003001.2-201ENST00000616294 831 ntBASIC3.82□□□□□ -1.8
CASP4P49662 AC006133.1-201ENST00000617106 264 ntBASIC3.82□□□□□ -1.8
CASP4P49662 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.82□□□□□ -1.8
CASP4P49662 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.82□□□□□ -1.8
CASP4P49662 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CASP4P49662 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.82□□□□□ -1.8
CASP4P49662 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CASP4P49662 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CASP4P49662 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CASP4P49662 SNORA62.3-201ENST00000365110 153 ntBASIC3.81□□□□□ -1.8
CASP4P49662 SNORD6-201ENST00000365444 73 ntBASIC3.81□□□□□ -1.8
CASP4P49662 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CASP4P49662 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
CASP4P49662 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CASP4P49662 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.81□□□□□ -1.8
CASP4P49662 PTP4A1P3-201ENST00000433661 420 ntBASIC3.81□□□□□ -1.8
CASP4P49662 RPS26P40-201ENST00000435209 294 ntBASIC3.81□□□□□ -1.8
CASP4P49662 HSPD1P21-201ENST00000436541 245 ntBASIC3.81□□□□□ -1.8
CASP4P49662 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.81□□□□□ -1.8
CASP4P49662 AC009263.1-201ENST00000441193 1239 ntBASIC3.81□□□□□ -1.8
CASP4P49662 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.81□□□□□ -1.8
CASP4P49662 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.81□□□□□ -1.8
CASP4P49662 MRPS31P2-201ENST00000451581 518 ntBASIC3.81□□□□□ -1.8
CASP4P49662 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
CASP4P49662 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.81□□□□□ -1.8
CASP4P49662 AC025518.1-201ENST00000479856 347 ntBASIC3.81□□□□□ -1.8
CASP4P49662 ACTG1P13-201ENST00000486987 1043 ntBASIC3.81□□□□□ -1.8
CASP4P49662 AC012170.1-201ENST00000495139 359 ntBASIC3.81□□□□□ -1.8
CASP4P49662 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.81□□□□□ -1.8
CASP4P49662 PCBP2P3-201ENST00000509726 843 ntBASIC3.81□□□□□ -1.8
CASP4P49662 AC110792.2-201ENST00000510278 224 ntBASIC3.81□□□□□ -1.8
CASP4P49662 PAICSP4-201ENST00000517543 1253 ntBASIC3.81□□□□□ -1.8
CASP4P49662 OR5AK3P-201ENST00000527486 1297 ntBASIC3.81□□□□□ -1.8
CASP4P49662 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CASP4P49662 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.81□□□□□ -1.8
CASP4P49662 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.81□□□□□ -1.8
CASP4P49662 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.81□□□□□ -1.8
CASP4P49662 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.81□□□□□ -1.8
CASP4P49662 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.81□□□□□ -1.8
CASP4P49662 NTAN1P1-201ENST00000603150 646 ntBASIC3.81□□□□□ -1.8
CASP4P49662 AP001033.2-201ENST00000609701 1003 ntBASIC3.81□□□□□ -1.8
CASP4P49662 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CASP4P49662 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.81□□□□□ -1.8
CASP4P49662 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CASP4P49662 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASP4P49662 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CASP4P49662 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
CASP4P49662 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASP4P49662 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.8□□□□□ -1.8
CASP4P49662 MTND4P21-201ENST00000453886 1357 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.8□□□□□ -1.8
CASP4P49662 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.8□□□□□ -1.8
CASP4P49662 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.8□□□□□ -1.8
CASP4P49662 ATP5F1P3-201ENST00000397213 657 ntBASIC3.8□□□□□ -1.8
CASP4P49662 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
CASP4P49662 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.8□□□□□ -1.8
CASP4P49662 HMGB3P18-201ENST00000406327 590 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.8□□□□□ -1.8
CASP4P49662 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.8□□□□□ -1.8
CASP4P49662 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.8□□□□□ -1.8
CASP4P49662 AC017083.1-201ENST00000428093 483 ntBASIC3.8□□□□□ -1.8
CASP4P49662 ELOCP6-201ENST00000429066 328 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AL158071.1-201ENST00000430315 461 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
CASP4P49662 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASP4P49662 RPS7P5-201ENST00000441482 581 ntBASIC3.8□□□□□ -1.8
CASP4P49662 MTCYBP21-201ENST00000443300 1113 ntBASIC3.8□□□□□ -1.8
CASP4P49662 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.8□□□□□ -1.8
CASP4P49662 ELOCP12-201ENST00000458706 328 ntBASIC3.8□□□□□ -1.8
CASP4P49662 SNORD105B-201ENST00000458770 79 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.8□□□□□ -1.8
CASP4P49662 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.8□□□□□ -1.8
CASP4P49662 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.8□□□□□ -1.8
CASP4P49662 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.8□□□□□ -1.8
CASP4P49662 LINC00557-201ENST00000563184 1279 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
CASP4P49662 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.8□□□□□ -1.8
CASP4P49662 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CASP4P49662 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASP4P49662 FRG1DP-201ENST00000635586 771 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms