Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 HSFY6P-201ENST00000445573 403 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 RPS29P31-201ENST00000446147 164 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 TPT1P12-201ENST00000448968 492 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC087879.1-201ENST00000474343 374 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC007688.1-201ENST00000475592 759 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 RPL31P13-201ENST00000484151 370 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CR1P49238 RN7SL323P-201ENST00000494712 295 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CR1P49238 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CR1P49238 ARL2BPP6-201ENST00000512757 439 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC108064.1-201ENST00000513791 460 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 RNU6-352P-201ENST00000516908 107 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CR1P49238 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CR1P49238 OR4R3P-201ENST00000525084 838 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.27□□□□□ -1.89
CX3CR1P49238 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CR1P49238 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC006960.3-201ENST00000561845 705 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CR1P49238 OR4G1P-201ENST00000588632 938 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 AC112230.1-201ENST00000604342 547 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AL590392.1-201ENST00000604960 446 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 BX323046.1-201ENST00000610145 535 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AL136295.6-201ENST00000610486 658 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 U73479.1-201ENST00000618062 168 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 AC020978.9-201ENST00000624380 1141 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CX3CR1P49238 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.27□□□□□ -1.89
CX3CR1P49238 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
CX3CR1P49238 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CR1P49238 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 AL359893.1-201ENST00000447628 1580 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 FAM91A3P-201ENST00000456826 2544 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 SAGE4P-201ENST00000442271 3381 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RNU6-600P-201ENST00000362524 99 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RNA5SP283-201ENST00000365604 119 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 MIR607-201ENST00000385241 96 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AL391417.1-201ENST00000404100 426 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 MIR1250-201ENST00000408098 113 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 MTCYBP24-201ENST00000420387 1106 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 TCEA1P2-201ENST00000420496 906 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 COX6CP17-201ENST00000421389 185 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AL390879.2-203ENST00000426943 1121 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RPL21P112-201ENST00000434403 463 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 OR4C10P-201ENST00000434991 931 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RAB11AP1-201ENST00000442978 646 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RNFT1P2-201ENST00000443064 757 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RPL23AP62-201ENST00000463396 453 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RPL23AP55-201ENST00000498163 452 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC010460.1-201ENST00000507087 466 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 HMGB3P15-201ENST00000507326 574 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 RN7SKP244-201ENST00000516513 307 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RN7SKP60-201ENST00000516985 239 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 MIR2116-201ENST00000517221 80 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CR1P49238 AL139174.1-201ENST00000531489 886 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.26□□□□□ -1.89
CX3CR1P49238 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 ZNF192P1-203ENST00000565888 810 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 MIR4425-201ENST00000580572 84 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CX3CR1P49238 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CR1P49238 AC021851.1-201ENST00000608537 1082 ntBASIC3.26□□□□□ -1.89
CX3CR1P49238 RMST_8.1-201ENST00000610287 165 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms