Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 TRIM51GP-201ENST00000534741 1350 ntBASIC6.47□□□□□ -1.37
VARSP26640 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 AC009902.3-201ENST00000606235 2172 ntBASIC6.47□□□□□ -1.37
VARSP26640 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VARSP26640 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 Y_RNA.39-201ENST00000362620 98 ntBASIC6.47□□□□□ -1.37
VARSP26640 RNU6-770P-201ENST00000363929 105 ntBASIC6.47□□□□□ -1.37
VARSP26640 Y_RNA.234-201ENST00000364409 97 ntBASIC6.47□□□□□ -1.37
VARSP26640 SNORD115-7-201ENST00000365306 82 ntBASIC6.47□□□□□ -1.37
VARSP26640 PRRC2CP1-201ENST00000404428 159 ntBASIC6.47□□□□□ -1.37
VARSP26640 MIR1252-201ENST00000408861 65 ntBASIC6.47□□□□□ -1.37
VARSP26640 MTCO3P19-201ENST00000415864 321 ntBASIC6.47□□□□□ -1.37
VARSP26640 THEM7P-201ENST00000419556 672 ntBASIC6.47□□□□□ -1.37
VARSP26640 SPATA20P1-201ENST00000423089 438 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC000089.1-201ENST00000424559 801 ntBASIC6.47□□□□□ -1.37
VARSP26640 RPL37P1-201ENST00000432310 284 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.47□□□□□ -1.37
VARSP26640 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.47□□□□□ -1.37
VARSP26640 MTND4LP30-201ENST00000454092 297 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC112492.4-201ENST00000456549 352 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 AC022215.1-201ENST00000481770 362 ntBASIC6.47□□□□□ -1.37
VARSP26640 CR383656.1-201ENST00000484916 377 ntBASIC6.47□□□□□ -1.37
VARSP26640 HMGB1P35-201ENST00000503360 598 ntBASIC6.47□□□□□ -1.37
VARSP26640 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC018797.3-201ENST00000513388 1241 ntBASIC6.47□□□□□ -1.37
VARSP26640 Y_RNA.673-201ENST00000516306 88 ntBASIC6.47□□□□□ -1.37
VARSP26640 SCARNA16.2-201ENST00000516520 172 ntBASIC6.47□□□□□ -1.37
VARSP26640 IGLVIV-64-201ENST00000518581 301 ntBASIC6.47□□□□□ -1.37
VARSP26640 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.47□□□□□ -1.37
VARSP26640 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.47□□□□□ -1.37
VARSP26640 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.47□□□□□ -1.37
VARSP26640 AC125612.1-201ENST00000547580 377 ntBASIC6.47□□□□□ -1.37
VARSP26640 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.47□□□□□ -1.37
VARSP26640 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.47□□□□□ -1.37
VARSP26640 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 RN7SL230P-201ENST00000580835 303 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC010424.2-201ENST00000607594 443 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC096772.1-201ENST00000609146 564 ntBASIC6.47□□□□□ -1.37
VARSP26640 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 AP001486.3-201ENST00000615334 372 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC025034.2-201ENST00000623264 286 ntBASIC6.47□□□□□ -1.37
VARSP26640 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
VARSP26640 AL512643.1-201ENST00000635735 524 ntBASIC6.47□□□□□ -1.37
VARSP26640 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.47□□□□□ -1.37
VARSP26640 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARSP26640 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.47□□□□□ -1.37
VARSP26640 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.47□□□□□ -1.37
VARSP26640 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
VARSP26640 SMG1P7-201ENST00000565246 2704 ntBASIC6.47□□□□□ -1.37
VARSP26640 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.47□□□□□ -1.37
VARSP26640 AC097714.1-201ENST00000511272 1647 ntBASIC6.47□□□□□ -1.37
VARSP26640 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
VARSP26640 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
VARSP26640 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
VARSP26640 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
VARSP26640 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
VARSP26640 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
VARSP26640 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.46□□□□□ -1.37
VARSP26640 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
VARSP26640 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.46□□□□□ -1.37
VARSP26640 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VARSP26640 AC010894.1-201ENST00000313760 361 ntBASIC6.46□□□□□ -1.38
VARSP26640 MIR19A-201ENST00000384878 82 ntBASIC6.46□□□□□ -1.38
VARSP26640 AL359694.1-201ENST00000403247 604 ntBASIC6.46□□□□□ -1.38
VARSP26640 AL353133.1-201ENST00000407695 401 ntBASIC6.46□□□□□ -1.38
VARSP26640 RNA5SP155-201ENST00000411154 129 ntBASIC6.46□□□□□ -1.38
VARSP26640 AL590135.1-201ENST00000422215 156 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC096775.1-201ENST00000437724 448 ntBASIC6.46□□□□□ -1.38
VARSP26640 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.46□□□□□ -1.38
VARSP26640 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.46□□□□□ -1.38
VARSP26640 FTH1P25-201ENST00000447665 469 ntBASIC6.46□□□□□ -1.38
VARSP26640 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.46□□□□□ -1.38
VARSP26640 HMGB3P21-201ENST00000452483 547 ntBASIC6.46□□□□□ -1.38
VARSP26640 CBX1P2-201ENST00000453841 458 ntBASIC6.46□□□□□ -1.38
VARSP26640 PRELID3BP1-201ENST00000457142 540 ntBASIC6.46□□□□□ -1.38
VARSP26640 RPL39P38-201ENST00000467018 153 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC104472.2-201ENST00000469035 601 ntBASIC6.46□□□□□ -1.38
VARSP26640 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
VARSP26640 RPL7AP23-201ENST00000482625 776 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC068305.1-201ENST00000497406 726 ntBASIC6.46□□□□□ -1.38
VARSP26640 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.46□□□□□ -1.38
VARSP26640 AC009901.1-201ENST00000506703 541 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC112191.2-201ENST00000522428 333 ntBASIC6.46□□□□□ -1.38
VARSP26640 TRIM77BP-201ENST00000524985 1119 ntBASIC6.46□□□□□ -1.38
VARSP26640 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.46□□□□□ -1.38
VARSP26640 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms