Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.66□□□□□ -1.5
NCLP19338 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 AC069213.2-201ENST00000420238 366 ntBASIC5.66□□□□□ -1.5
NCLP19338 DDX39BP1-205ENST00000422507 192 ntBASIC5.66□□□□□ -1.5
NCLP19338 USP9YP7-201ENST00000436723 430 ntBASIC5.66□□□□□ -1.5
NCLP19338 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.66□□□□□ -1.5
NCLP19338 TDGF1P1-201ENST00000445734 527 ntBASIC5.66□□□□□ -1.5
NCLP19338 USP9YP32-201ENST00000452432 430 ntBASIC5.66□□□□□ -1.5
NCLP19338 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 USP9YP34-201ENST00000453983 808 ntBASIC5.66□□□□□ -1.5
NCLP19338 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 RPS20P32-201ENST00000456044 356 ntBASIC5.66□□□□□ -1.5
NCLP19338 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.66□□□□□ -1.5
NCLP19338 AC097493.1-201ENST00000463958 372 ntBASIC5.66□□□□□ -1.5
NCLP19338 AC004263.1-201ENST00000479327 332 ntBASIC5.66□□□□□ -1.5
NCLP19338 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.66□□□□□ -1.5
NCLP19338 CEACAMP10-202ENST00000495431 496 ntBASIC5.66□□□□□ -1.5
NCLP19338 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.66□□□□□ -1.5
NCLP19338 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.66□□□□□ -1.5
NCLP19338 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 AC109458.1-201ENST00000508858 316 ntBASIC5.66□□□□□ -1.5
NCLP19338 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.66□□□□□ -1.5
NCLP19338 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.66□□□□□ -1.5
NCLP19338 RNU6-150P-201ENST00000516237 95 ntBASIC5.66□□□□□ -1.5
NCLP19338 RN7SKP260-201ENST00000516907 149 ntBASIC5.66□□□□□ -1.5
NCLP19338 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.66□□□□□ -1.5
NCLP19338 DEFB131D-201ENST00000526803 184 ntBASIC5.66□□□□□ -1.5
NCLP19338 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.66□□□□□ -1.5
NCLP19338 OR4P1P-201ENST00000530808 1136 ntBASIC5.66□□□□□ -1.5
NCLP19338 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.66□□□□□ -1.5
NCLP19338 ZNF321P-202ENST00000550843 495 ntBASIC5.66□□□□□ -1.5
NCLP19338 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.66□□□□□ -1.5
NCLP19338 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.66□□□□□ -1.5
NCLP19338 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 MIR4330-201ENST00000579077 105 ntBASIC5.66□□□□□ -1.5
NCLP19338 MIR4480-201ENST00000582492 71 ntBASIC5.66□□□□□ -1.5
NCLP19338 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NCLP19338 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.66□□□□□ -1.5
NCLP19338 AC103792.1-201ENST00000603591 919 ntBASIC5.66□□□□□ -1.5
NCLP19338 RPL23AP92-201ENST00000603609 255 ntBASIC5.66□□□□□ -1.5
NCLP19338 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.66□□□□□ -1.5
NCLP19338 AC093799.2-201ENST00000610062 578 ntBASIC5.66□□□□□ -1.5
NCLP19338 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NCLP19338 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NCLP19338 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NCLP19338 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NCLP19338 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NCLP19338 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NCLP19338 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NCLP19338 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NCLP19338 RNU6-878P-201ENST00000384578 110 ntBASIC5.65□□□□□ -1.5
NCLP19338 MIR3074-201ENST00000384885 81 ntBASIC5.65□□□□□ -1.5
NCLP19338 RNA5SP372-201ENST00000390836 115 ntBASIC5.65□□□□□ -1.5
NCLP19338 DHFRP6-201ENST00000401776 268 ntBASIC5.65□□□□□ -1.5
NCLP19338 AL049545.1-201ENST00000401856 572 ntBASIC5.65□□□□□ -1.5
NCLP19338 U3.35-201ENST00000408405 208 ntBASIC5.65□□□□□ -1.5
NCLP19338 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 CEACAMP8-201ENST00000413902 580 ntBASIC5.65□□□□□ -1.5
NCLP19338 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.65□□□□□ -1.5
NCLP19338 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 PSMA6P3-201ENST00000428242 164 ntBASIC5.65□□□□□ -1.5
NCLP19338 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.65□□□□□ -1.5
NCLP19338 KNOP1P3-201ENST00000446933 426 ntBASIC5.65□□□□□ -1.5
NCLP19338 MTND2P19-201ENST00000449129 1012 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC005297.2-201ENST00000450430 606 ntBASIC5.65□□□□□ -1.5
NCLP19338 HIGD1AP8-201ENST00000453927 274 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.65□□□□□ -1.5
NCLP19338 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.65□□□□□ -1.5
NCLP19338 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.65□□□□□ -1.5
NCLP19338 HMGN2P25-201ENST00000486956 268 ntBASIC5.65□□□□□ -1.5
NCLP19338 FAM172BP-201ENST00000487497 1089 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC146944.2-203ENST00000502493 354 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC025445.1-201ENST00000502728 300 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.65□□□□□ -1.5
NCLP19338 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NCLP19338 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.65□□□□□ -1.5
NCLP19338 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.65□□□□□ -1.5
NCLP19338 AC139495.1-202ENST00000513164 354 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC119751.5-201ENST00000514077 770 ntBASIC5.65□□□□□ -1.5
NCLP19338 AP001922.4-201ENST00000526967 290 ntBASIC5.65□□□□□ -1.5
NCLP19338 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 AC024224.1-201ENST00000538284 609 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 NMNAT1P1-201ENST00000554095 876 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC009094.1-201ENST00000564443 426 ntBASIC5.65□□□□□ -1.5
NCLP19338 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NCLP19338 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.65□□□□□ -1.5
NCLP19338 SNORA74C-1-201ENST00000580726 201 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC008751.2-201ENST00000597885 980 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.65□□□□□ -1.5
NCLP19338 COX6CP4-201ENST00000605798 228 ntBASIC5.65□□□□□ -1.5
NCLP19338 AC097065.2-201ENST00000608159 533 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms